Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1547 |
Symbol | |
ID | 2687097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1699486 |
End bp | 1700907 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637126226 |
Product | TPR domain-containing protein |
Protein accession | NP_952598 |
Protein GI | 39996647 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.661842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATGA ACAGCGAACC CACACCCGCC GAAGCATTCT TTCTGGAAGG AAACCGCCTG CTGGCGGCTA GCGAGTGCCG CGCCGCGGAG GCCTGTTTCC GCGAGGCACT CGCGCTTGCG CCGGATTTTG CCGAGGCCCA TGCCAATCTC GGCATGCTGC TGGACCAGGA GGGGATGGCG GCCGAGGCGG AGCGCCAGTA CCGGCTGGCC TTGGCGCTGA ATCCCCGCCT GGGGCATACG CATTCCAACC TGGGTGTGCT GCTGGCGAAC CAGAAGCGGT TCGAGGAGGC GGAGAGCGCG TACTTGAGCG CCATCGAGCT TGAGCCGGAC AGCCCGGCGG CGTGGTCCAA CCTGGGGGTG CTGCAGGCCT GCCGGAAGCA GGAACGGGAG GCGGAGGAAA GTTATCGCAC GGCCCTGCGG CTGGACCCGG ACTATCACCG GGCATCGTTC AACCTCAGTT ACCTGCTGCT GCGCCAGGGC CGCTTCGACG AGGGGTGGTC CCTGCTGGAG AGCCGGAACC GGCGCTGGTT CGCCCGGCTG GAGGAGCATC TGCCGTGCCC CCGCTGGCGC GGCGAGGATC TGCAGGGGCG CTCCCTGTTG ATCGGCCTGG AGGCTGGGCA TGGGGATATG ATCCAGTTCT GCCGCTACGC GCCGCTTCTC AAGGACCGGG GGGCGGCCCG GATCACCCTG GTGTGCCACG TGGCGCTGAA AGACCTCTTG AAGACCCTTG ACGGTGTTGA TACTGTTATC TCCTTTGACG AGATCCTGCC GGATGATGCG TGGGACTTCT GGACCCCGGC CATGAGCATC CCCTGTTATT GCCGGACCCG TCTCGATTCG ATCCCCGCCC GCATCCCGTA CCTGCACGCC GATCCCGGTC TGGCCGAGCA GTGGGCGGCT ATGCTGGAGC GGGAATGGGC CGGGCCGGAA ATGCGGATCG GCCTAGCGTG GAAGGGAAAT CCCCATTTCG AGAACGATGG GGACCGTTCC CTGCCGCACC TGAAGACCCT GGAGCCACTT GGCGCCGTGG CCGGGGTGCG GTTCTTCAGC CTGCAGAAAG GGGCGGGCGA GGAAGAGGCG GCCCAGCCAC CCGCCGGCCT GCCCGTGGTG AACCTGATGC GGCATATTGC CGGCTTTGCC GACACCGCCG CCCTGGTGGC CAACCTGGAT CTGGTCATTA CCGTGGATAC CGCCGTGGCT CATCTGGCAG GGGCGCTGGG CACGGAGTGC TGGGTGCTCC TGCCGGAGTA CCGGACCGAT TGGCGCTGGC TCACCGGCCG GACCGATTCG CCCTGGTATC CCGGGGTCAT GCGCCTGTTC CGCCAGCCCC GCGTGGGAGA CTGGGAGACG GTGGTGGCCG AGGTGGGGGA GGCGCTCCGG TTGTTTGCCG CACGTCCCCG CAGCCCGCGG GGGACGCGTT GA
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Protein sequence | MSMNSEPTPA EAFFLEGNRL LAASECRAAE ACFREALALA PDFAEAHANL GMLLDQEGMA AEAERQYRLA LALNPRLGHT HSNLGVLLAN QKRFEEAESA YLSAIELEPD SPAAWSNLGV LQACRKQERE AEESYRTALR LDPDYHRASF NLSYLLLRQG RFDEGWSLLE SRNRRWFARL EEHLPCPRWR GEDLQGRSLL IGLEAGHGDM IQFCRYAPLL KDRGAARITL VCHVALKDLL KTLDGVDTVI SFDEILPDDA WDFWTPAMSI PCYCRTRLDS IPARIPYLHA DPGLAEQWAA MLEREWAGPE MRIGLAWKGN PHFENDGDRS LPHLKTLEPL GAVAGVRFFS LQKGAGEEEA AQPPAGLPVV NLMRHIAGFA DTAALVANLD LVITVDTAVA HLAGALGTEC WVLLPEYRTD WRWLTGRTDS PWYPGVMRLF RQPRVGDWET VVAEVGEALR LFAARPRSPR GTR
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