Gene GSU1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1547 
Symbol 
ID2687097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp1699486 
End bp1700907 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content67% 
IMG OID637126226 
ProductTPR domain-containing protein 
Protein accessionNP_952598 
Protein GI39996647 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.661842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATGA ACAGCGAACC CACACCCGCC GAAGCATTCT TTCTGGAAGG AAACCGCCTG 
CTGGCGGCTA GCGAGTGCCG CGCCGCGGAG GCCTGTTTCC GCGAGGCACT CGCGCTTGCG
CCGGATTTTG CCGAGGCCCA TGCCAATCTC GGCATGCTGC TGGACCAGGA GGGGATGGCG
GCCGAGGCGG AGCGCCAGTA CCGGCTGGCC TTGGCGCTGA ATCCCCGCCT GGGGCATACG
CATTCCAACC TGGGTGTGCT GCTGGCGAAC CAGAAGCGGT TCGAGGAGGC GGAGAGCGCG
TACTTGAGCG CCATCGAGCT TGAGCCGGAC AGCCCGGCGG CGTGGTCCAA CCTGGGGGTG
CTGCAGGCCT GCCGGAAGCA GGAACGGGAG GCGGAGGAAA GTTATCGCAC GGCCCTGCGG
CTGGACCCGG ACTATCACCG GGCATCGTTC AACCTCAGTT ACCTGCTGCT GCGCCAGGGC
CGCTTCGACG AGGGGTGGTC CCTGCTGGAG AGCCGGAACC GGCGCTGGTT CGCCCGGCTG
GAGGAGCATC TGCCGTGCCC CCGCTGGCGC GGCGAGGATC TGCAGGGGCG CTCCCTGTTG
ATCGGCCTGG AGGCTGGGCA TGGGGATATG ATCCAGTTCT GCCGCTACGC GCCGCTTCTC
AAGGACCGGG GGGCGGCCCG GATCACCCTG GTGTGCCACG TGGCGCTGAA AGACCTCTTG
AAGACCCTTG ACGGTGTTGA TACTGTTATC TCCTTTGACG AGATCCTGCC GGATGATGCG
TGGGACTTCT GGACCCCGGC CATGAGCATC CCCTGTTATT GCCGGACCCG TCTCGATTCG
ATCCCCGCCC GCATCCCGTA CCTGCACGCC GATCCCGGTC TGGCCGAGCA GTGGGCGGCT
ATGCTGGAGC GGGAATGGGC CGGGCCGGAA ATGCGGATCG GCCTAGCGTG GAAGGGAAAT
CCCCATTTCG AGAACGATGG GGACCGTTCC CTGCCGCACC TGAAGACCCT GGAGCCACTT
GGCGCCGTGG CCGGGGTGCG GTTCTTCAGC CTGCAGAAAG GGGCGGGCGA GGAAGAGGCG
GCCCAGCCAC CCGCCGGCCT GCCCGTGGTG AACCTGATGC GGCATATTGC CGGCTTTGCC
GACACCGCCG CCCTGGTGGC CAACCTGGAT CTGGTCATTA CCGTGGATAC CGCCGTGGCT
CATCTGGCAG GGGCGCTGGG CACGGAGTGC TGGGTGCTCC TGCCGGAGTA CCGGACCGAT
TGGCGCTGGC TCACCGGCCG GACCGATTCG CCCTGGTATC CCGGGGTCAT GCGCCTGTTC
CGCCAGCCCC GCGTGGGAGA CTGGGAGACG GTGGTGGCCG AGGTGGGGGA GGCGCTCCGG
TTGTTTGCCG CACGTCCCCG CAGCCCGCGG GGGACGCGTT GA
 
Protein sequence
MSMNSEPTPA EAFFLEGNRL LAASECRAAE ACFREALALA PDFAEAHANL GMLLDQEGMA 
AEAERQYRLA LALNPRLGHT HSNLGVLLAN QKRFEEAESA YLSAIELEPD SPAAWSNLGV
LQACRKQERE AEESYRTALR LDPDYHRASF NLSYLLLRQG RFDEGWSLLE SRNRRWFARL
EEHLPCPRWR GEDLQGRSLL IGLEAGHGDM IQFCRYAPLL KDRGAARITL VCHVALKDLL
KTLDGVDTVI SFDEILPDDA WDFWTPAMSI PCYCRTRLDS IPARIPYLHA DPGLAEQWAA
MLEREWAGPE MRIGLAWKGN PHFENDGDRS LPHLKTLEPL GAVAGVRFFS LQKGAGEEEA
AQPPAGLPVV NLMRHIAGFA DTAALVANLD LVITVDTAVA HLAGALGTEC WVLLPEYRTD
WRWLTGRTDS PWYPGVMRLF RQPRVGDWET VVAEVGEALR LFAARPRSPR GTR