Gene GSU1535 details

Gene Information

• Locus tag: GSU1535
• Symbol: recD
• ID: 2687164
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 1687048
• End bp: 1688835
• Gene Length: 1788 bp
• Protein Length: 595 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637126214
• Product: exodeoxyribonuclease V, alpha subunit
• Protein accession: NP_952586
• Protein GI: 39996635
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
• TIGRFAM ID: [TIGR01447] exodeoxyribonuclease V, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.559097
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTGCCG ACGACCTGCA ATTCCGCGAC ATCGACGCCT GTTTTGCCGA CTTCCTCTGC 
CGCCTGGCCG GGGGCCGGAA CGACGATCTC CATCGGGCCG CCATGCACGC CAGCGCCGCC 
GTAGGGGCCG GCCACGTCTG CCTGCACCTG GACGAGGCCT TTGGCAGCAA TGGAGCGGCC 
CTGGCCGTCA CCCTCAGGGC CCTGCCGGTG GTGGGCCCGC CCGGTGGCCG CACCCCCCTG 
ATCCTTGACG AAAAGAACCG CCTCTACCTT TATCGATACT GGAACTATGA ATATCTAGTT 
GCTGAATTCA TAAAGCAAAA ATCCGCAGAG CTCCGTCCCG TTTCCCTGCC GCTCCTGCGG 
GCGGGTATTG ACCGGATCTT CGGGCCGAAG GGGGACGATG CCGTGGACTG GCAGCGGGTG 
GCTGCCGCGG CCGCGGTGCG GAGCGGCTTT TGCGTCATCT CCGGGGGGCC GGGTACCGGC 
AAGACCTCCA CCGTGGTTTC GATCCTGGCC CTGCTCCTGG AGCAGGCCGG CGAGGAGGGG 
GCGGGCATTG CCCTGGCAGC GCCCACGGGA AAGGCCGCGG CGCGGCTCGG CGACTCCATC 
CGCGACGCCC GTCAGCGCCT GGCAGCGGTG ACCCCCGTGG CGGAACGGAT TCCCGGCCAG 
GTCTCCACCA TCCACCGGCT GCTGGGGGTG ATTCCCGGCT CGGTCCGTTT CCGTCATGAC 
CGGCACAATC CGCTGCCCCA CCGGGTAGTG GTGGTGGACG AGGCCTCCAT GGTGCCGCTG 
CCTCTCATGG CCCGGCTGGT GGAGGCCCTG GCGCCGTCGG CTCGGCTCAT CCTCCTGGGG 
GACCGGGACC AGCTCGCCTC GGTGGAGGCC GGGGCCGTGC TGGGCGACAT CTGCGACACC 
GGGCGGGCGC ACCGGTTCTC GGCCCCGTTC CGGGAGTTCA TCCGTGATGC CGCGAGTGAG 
GAGATCGAGG GAGAAGCCGG GGACGACGGG AACGACCAGC CGGGTACGCC GGCCGACTCC 
CTGGTGATCC TGCGCAGGAA CTACCGCTTC GGTGCGGCCA GCGCCATTGG CGCGGCCAGT 
GCGGCCGTGA ACGAGGGCGA CGGGGACCGG CTCATGGCGC TTGTGTCAGG AGAAGGGATG 
GACGGAGGCG TGGCGCTCCG GCCCGTGCCG CCGGCGGAGC GGCTTGCCGG GGCCCTGGCT 
GAGAGCGTTG TTGCGGGGTA CGGCGAGTAT CTGGGGCAGG CGGACCCGGA ACAGGCCCTG 
GCCTGCTTCG ACCGCTTCCG GGTCCTTTGT GCCGTTCGGC AGGGGGAGTA CGGGGTGCAG 
GGGCTCAACC GGGCCATCGA GCGGGTCCTG GCACGGCAGG GGCTCATCGA TGCCGACCGC 
GTCTGGTATC CGGGGCGGCC GGTCATGGTG ACGGTGAACG ACTACGGGCT GGGGCTTTTC 
AACGGCGACA TCGGCCTGGC GGTTGCCGAT CCCGCCTTCA GCGGCGGCCT GGCCGTCTGC 
TTTCCCGCAC CAGGCGGCGG AGTCAGAAAG ATTTCCCCGG CCCGGCTGCC CGCCCACGAA 
ACGGTTTTCG CCATGACGGT CCACAAGAGC CAGGGGTCCG AGTTCGACCG GATTCTGCTG 
GTGCTCCCCC CCTTCGACAG TCCCGTGCTC ACGCGGGAAC TGGTCTACAC GGGACTCACC 
CGCGCCCGGA CCGGTGCGGT CATCTGGGCG GACGAGGAGA TCCTGCGGTC CGCTGCGGCG 
CGGAGGAGCG AACGGCGGTC GGGCCTGCGG GAAGCGTTGT GGGGATGA 

 

Protein sequence

MSADDLQFRD IDACFADFLC RLAGGRNDDL HRAAMHASAA VGAGHVCLHL DEAFGSNGAA 
LAVTLRALPV VGPPGGRTPL ILDEKNRLYL YRYWNYEYLV AEFIKQKSAE LRPVSLPLLR 
AGIDRIFGPK GDDAVDWQRV AAAAAVRSGF CVISGGPGTG KTSTVVSILA LLLEQAGEEG 
AGIALAAPTG KAAARLGDSI RDARQRLAAV TPVAERIPGQ VSTIHRLLGV IPGSVRFRHD 
RHNPLPHRVV VVDEASMVPL PLMARLVEAL APSARLILLG DRDQLASVEA GAVLGDICDT 
GRAHRFSAPF REFIRDAASE EIEGEAGDDG NDQPGTPADS LVILRRNYRF GAASAIGAAS 
AAVNEGDGDR LMALVSGEGM DGGVALRPVP PAERLAGALA ESVVAGYGEY LGQADPEQAL 
ACFDRFRVLC AVRQGEYGVQ GLNRAIERVL ARQGLIDADR VWYPGRPVMV TVNDYGLGLF 
NGDIGLAVAD PAFSGGLAVC FPAPGGGVRK ISPARLPAHE TVFAMTVHKS QGSEFDRILL 
VLPPFDSPVL TRELVYTGLT RARTGAVIWA DEEILRSAAA RRSERRSGLR EALWG