| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1534 |
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| Symbol | recB |
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| ID | 2685262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 1683437 |
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| End bp | 1687051 |
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| Gene Length | 3615 bp |
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| Protein Length | 1204 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637126213 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | NP_952585 |
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| Protein GI | 39996634 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTTCCC TGCGACCCCA TGACAATCTG ACCGTGGAAC TGTCCGGCCA CAACCTGGTG
GAAGCCAGCG CCGGCACGGG CAAGACCTTT GCCATAGCCT GCCTCTACCT GCGCCTGGTG
GTGGAAGGGG AGGGGCTGCT CCCCGATAAC ATCCTGGTGG TGACCTTTAC CGAGGCGGCC
ACCAAGGAGC TGCGCGCCCG CATCCGCCAG CGGCTGCGCC AGGCCCGCGA CCGGTTCGCC
GGTGGGGGCG CGCCGGACGA GTTCCTCGAC CGGCTGGCCC TGGGTGAGCG CTGGCCGGGG
CACGCCACAG CCCTGGCCCG GATAGACAGC GCCCTCCAGA CCTTCGACTG CGCCGCCATC
TCCACCATCC ACGGCTTCTG CCTCCGGGCG CTCCAGGAAA ACGCCTTCGA GAGCGGTTCC
CTGTTCGACA CCGAACTGGC GGCGGACCAG GAACCGCTCC TGCGCCAGGT GGCGGACGAT
TTCTGGCGCC ACCACTTCTT CGGCGCTGAC GCGCCGCTGC TCCCCCTGGC CCTGGGCCGG
CGCTGGTCCC CGGAGGAACT GGCGGCATTC CTGCGGAACA TTGCCGGCAA GCCCCACCTG
GCCGTGGAGC CGGTCTGGCA TTCCGGTGAA GCGGACCGCG TGGCCGGGGA GATCCGGGAC
GCCTTTGCCG CGCTCTCGTC CCTCTGGCGG ACGCAACGGG CGGAGATTGC CGCCATCCTG
GCCGCCGATC CCGGGCTGAG CCGCTCCAGG AGCAACTACC ACCCGGACCT GGTGCCGGGA
CTTCTGGTCG CCATGGACGG CTACGCGGCC GGAGCGGACC CCTACGCGCT CTTTGCCGGG
TTCGACAAAT TCACCACCGG GTTCCTGGCC GGGCAGCGGC TCAAAAAGGC CGACCCGCCC
CGGCACGACT GCTTCGATCT CTGCGACCGC CTGGCACGGC TCACCTCCCA GCGGCTCCTG
CTTCTGAAGG CCGAGTTCGC GGCCCGGGGC CGGGAGCGGC TGGCCGCGCT CAAGGCGCAG
CGCAACGTCC GGGGATATGA TGACCTGCTC ACGGACCTCC ACGCCGCCCT TGGCGGGCCC
GGCGGCGCGG CCCTGGCCGA CCGGCTGCGT GAGCGCTACC GGGCCGCCCT CATCGACGAG
TTCCAGGACA CGGACCAGGT CCAGTACCGG ATCTTCCGGG CGGTCTTCAG CGGCGGCGCA
GTGCCCCTGT TTCTGATCGG CGACCCCAAG CAGGCCATCT ACAGCTTCCG GGGGGCCGAC
GTTTTCGCCT ACCTGGAGGC CCGGCAGGAG ATCCCGGCGG AGCGGCGCTT CACCATGGAC
CGCAACTGGC GCTCCACGCC GGAGATGGTC GAAGCGGTGA GTTCCCTGTT CCGCCTGGGG
GGGGAGCACC CCTTCCTGGC CGGCGACATC GCCTTTCCCC CGGTCACGGC GGCCCGGCGG
CAGGGATGTT CCTTCGGCGA CCGCGATCCG GCACCGCTCC AGCTCTGGTT CTTCCGCCGG
GGCGAGAGCG ACCGCGACTG CATCAACCTG GGTACGGGCC GGCAGCGGAT CGTCACCGCC
GTTGCCGACG AGATCTCCGG GCTCCTGGCC GACGGCCGCG CCGGCACGGC CTGCCTGGAG
GACGAGGACG GGCGGATGCA GCCCCTCACC CCCGGCGACG TGGCCGTCAT CGTCCGGTCC
CACTTCGAGG CGGGCCTGGT CCAGCAGGCC CTGCGGGAGC GGGGCATCCC CTCCGTGGTC
CAGAGTGCCG ACAGCCTGTT CGAGACCCGC GAGGCCGGCG AGGTCTGGAC CGTGATGGGG
GCCGTGGCCG AGCCGGGGAA CGAGGGGCGG GTCAGGGCGG CCCTGGTCAC GGCGCTCTTC
GGGCTCAACG GCAACGACCT GGCGCTTCTC ATGGAGCAGG AGGCGGCCTG GGAAGCGCGG
ATCGCCGCCT TCCGCGACTA CCGCGACCTC TGGCGCGAGC AGGGCTTCAT GACCATGTTC
CGCGCCCTCC TGGACCGGGA GGGGGTGAGG GAGCGGTGCC TTCCCCTGCC CGACGGGGAA
CGGCGGCTCA CCAACCTGCG CCACTGCGCC GAGGTGCTCC ACCAGGCGGC CGTTGAGCGG
CGTCTCGGCC CCGATGCCCT GACGGCGTGG TTCGGGGAGC GGGTGAGCGT GCCCCCGCCC
GGGGAGGATT ACCAGATCCG GCTCGAATCG GACGACCGGG CGGTCCGCAT CGTCACGGTC
CACGTCAGCA AGGGGCTGGA GTATCCCGTG GTCTTTGCCC CCTTCATGTG GGGCGGGTTG
CGGGATGACG GGGACCTGAC CCTCTGTCAC GAGGAGGGCT ACCGGCTGGT GGCGGATTTC
GGCACCGACC GCCGGGACGA GCGGCAGCGC CGGGCCCGCA CCGAGGCCCT GGCCGAGAAT
CTCCGCCTCC TCTACGTGGC CCTCACCAGG GCCCGCTGCC GCGCCTACCT GGTCTGGGGT
AAGTTCCGCG GCGCCGAGAC ATCGGCTCCG GGCTGGCTCC TCCACGGCAG CCGGCCCGAC
GGGGGAGGCG ACCCGGTGGC GCTCCTGGAA GGGACCCTGA AGAAGGCGAC CGACCAGACC
CTGCTGGAGC GGCTCGACCA CCTGGCAACG GCAAGCGGCG GAGGCATTGC CGTGACCGAA
GACCCGTGCC CGGACCGGCT GCCCCGCTTC CGGCCGGCCA TGGGTGAGGC GCCGCTGGTC
TGCCGGGACT TCAGGGGCGA CATCGACGCG GGCTGGCGGG TGGCCAGCTT CACCTCCTTT
GCCTCGGGGC ACCGGGAACC CGCCGAGTTG CCGGACCGGG ACCAGACCCC GCCGGAGCTT
CCGCCCGACG CGGCCAGCGA CACGGCAGCC CCGCCCGAGG GCTCCATGTT CGCCTTTCCC
CGGGGGCCCC GGGCCGGCAT CTTCCTGCAC GGCCTCTTCG AGCAGCTCGA TTTTGCCGTT
GCCGGCGACG ATACGGTGCG GGACCTGGTC CGGCGCGAAC TGGAGCGCAA CGGCCATGGC
GCCCAGTGGC TCGATCCGGT GAGCCGCATG GTCGGCAACG TCCTGAATGT TCCTCTGGGC
GGGGAGGGGA ATTCTTTCCG TCTGGCCGAC CTGGCCCCCG GCAGCTGGCT GGCGGAGCTG
GAGTTCTATT TCCCGCTCCG GTTCGTGCGG GACGCCCAAG TGGCAACCAT CCTGGCCGGG
GCCGGGGTGC TCCCCCAGGG GGCCGACCTG GGGGCGGTGG CGCGCCGGAT CGCCTTCGGC
GAGGCCCGGG GCATGGTGCG CGGCTTCGTT GACCTGGTGT TCCGCCACAG TGGCCGCTAC
TACCTGATCG ACTGGAAATC GAACCACCTG GGGAACCGGG CCGAGGATTA CGGCCCCGAG
CGCCTCTGCC GGGAGATGGA GCGCTCCCTC TATCCGCTCC AGTACCTGCT CTACACCGTG
GCCCTCAACC GCTTCCTGGA GCGCCGTCTG CCCGGCTATC GCTACGAGGA GCACTTCGGC
GGAGTGTTCT ACCTGTTCCT GCGGGGGATC GATCCCGAAC GCCCCGCCCT GGGGGTCTAT
CATGACCTGC CGCGGCCCGA CCTAGTGCGG GCATTGACCG ACTGCCTCGC CGGGCGGGAA
GGAGGAGCGC CGTGA
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| Protein sequence | MTSLRPHDNL TVELSGHNLV EASAGTGKTF AIACLYLRLV VEGEGLLPDN ILVVTFTEAA
TKELRARIRQ RLRQARDRFA GGGAPDEFLD RLALGERWPG HATALARIDS ALQTFDCAAI
STIHGFCLRA LQENAFESGS LFDTELAADQ EPLLRQVADD FWRHHFFGAD APLLPLALGR
RWSPEELAAF LRNIAGKPHL AVEPVWHSGE ADRVAGEIRD AFAALSSLWR TQRAEIAAIL
AADPGLSRSR SNYHPDLVPG LLVAMDGYAA GADPYALFAG FDKFTTGFLA GQRLKKADPP
RHDCFDLCDR LARLTSQRLL LLKAEFAARG RERLAALKAQ RNVRGYDDLL TDLHAALGGP
GGAALADRLR ERYRAALIDE FQDTDQVQYR IFRAVFSGGA VPLFLIGDPK QAIYSFRGAD
VFAYLEARQE IPAERRFTMD RNWRSTPEMV EAVSSLFRLG GEHPFLAGDI AFPPVTAARR
QGCSFGDRDP APLQLWFFRR GESDRDCINL GTGRQRIVTA VADEISGLLA DGRAGTACLE
DEDGRMQPLT PGDVAVIVRS HFEAGLVQQA LRERGIPSVV QSADSLFETR EAGEVWTVMG
AVAEPGNEGR VRAALVTALF GLNGNDLALL MEQEAAWEAR IAAFRDYRDL WREQGFMTMF
RALLDREGVR ERCLPLPDGE RRLTNLRHCA EVLHQAAVER RLGPDALTAW FGERVSVPPP
GEDYQIRLES DDRAVRIVTV HVSKGLEYPV VFAPFMWGGL RDDGDLTLCH EEGYRLVADF
GTDRRDERQR RARTEALAEN LRLLYVALTR ARCRAYLVWG KFRGAETSAP GWLLHGSRPD
GGGDPVALLE GTLKKATDQT LLERLDHLAT ASGGGIAVTE DPCPDRLPRF RPAMGEAPLV
CRDFRGDIDA GWRVASFTSF ASGHREPAEL PDRDQTPPEL PPDAASDTAA PPEGSMFAFP
RGPRAGIFLH GLFEQLDFAV AGDDTVRDLV RRELERNGHG AQWLDPVSRM VGNVLNVPLG
GEGNSFRLAD LAPGSWLAEL EFYFPLRFVR DAQVATILAG AGVLPQGADL GAVARRIAFG
EARGMVRGFV DLVFRHSGRY YLIDWKSNHL GNRAEDYGPE RLCREMERSL YPLQYLLYTV
ALNRFLERRL PGYRYEEHFG GVFYLFLRGI DPERPALGVY HDLPRPDLVR ALTDCLAGRE
GGAP
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