Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1505 |
Symbol | |
ID | 2686112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1649937 |
End bp | 1651205 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637126181 |
Product | ABC transporter, ATP-binding protein |
Protein accession | NP_952556 |
Protein GI | 39996605 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.334414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACG TCATTTCGGT CGAGAACCTC GGTAAAAAAT ACCTCATCAG CCACCAGGGC AGGGAACCCT ACACGGCCCT ACGCGACGTG CTTACCGATG GGGCGCGTGC GTTCTACCGC CGGTTGTTTT CGCCCGGAAC GAGCCAAGCG GACGCACAGG CCGAGGAGTT TTGGGCGCTG AAGGATGTTT CGTTCGAGGT GAAGCAGGGT GATCGAATTG GTATCATCGG CCGCAACGGG GCTGGGAAGT CGACGCTGCT CAAGATACTG AGCCGTATTA CCGAGCCGAC AGAGGGGCGC GTCAGGATCA GGGGACGGGT AGCGAGCCTT CTGGAAGTTG GGACCGGCTT TCACCCTGAA CTAACCGGAC GGGAAAATAT TTTTCTGAAC GGGGCCATAC TCGGTATGAA CCGGGCGGAG ATCGCCCGCA AGTTTGATGA GATTGTTGCT TTTGCGGAGA TTGAGAAGTT TCTCGATACG CCGGTGAAGA GATATTCTTC GGGGATGTAC GTACGGCTGG CTTTCGCCGT GGCGGCGCAT CTGGAACCAG AGATCCTAAT TGTTGATGAG GTGCTGGCGG TAGGGGATGC ACAGTTTCAA AATAAATGTC TTGGCAAGAT GGAGGATGTA TCGACAAAAG AAGGTAGGAC GGTGCTGTTT GTAAGTCATA ATATGGGGGC TATCGACCGA TTGTGTACTC GGGCGGTTCT GCTCGAAAGG GGGCGGGTCC GTCTCGCCGA CTTCACAAAG CCCGTGATTC AGATGTACTT GGACAAGGCG AAGAACGCGA TATCTGCCTG GAGCTGCTCA ACATCAATTC CTGACTTTGA TGGGATCTTT TTCGAATCAA TTAGCATCGT CAACAAGGAC AGAAAGATTG CAGAGGTTTT GCCCTCTAAT GAACCATTCT CGATTACCCT TGTGGTCAAT GCCACCGCTT CGCTAAAGGG AGTGCAGATC GCCATCAGAA TAACCAACGA GCAAGGGATT CCAATTCTCA CCACAACCAA CTGTGATAAG GCAGGAAAGC TGCAGGAGAT CAGCAGGGGG AGGTACCGGT ACACAGTTTC TCTTCCGGCA AGTTTTCTGC CACCTGGGTA TTACACGCTG ATTGTTGCCT CCTTTGTCCC CGGTGAAAAG CTGTTCGACG GCGTTGAAGA CAAGCTTGGG TTTTGCATCG ATGATATGGG CTCGCTTGCG ACTCTGATGA AGGATGGTCG GCTAGGAGTT GTGACCCCCC TGATGCCTTG GGACGAGGTT CGTTTATGA
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Protein sequence | MSNVISVENL GKKYLISHQG REPYTALRDV LTDGARAFYR RLFSPGTSQA DAQAEEFWAL KDVSFEVKQG DRIGIIGRNG AGKSTLLKIL SRITEPTEGR VRIRGRVASL LEVGTGFHPE LTGRENIFLN GAILGMNRAE IARKFDEIVA FAEIEKFLDT PVKRYSSGMY VRLAFAVAAH LEPEILIVDE VLAVGDAQFQ NKCLGKMEDV STKEGRTVLF VSHNMGAIDR LCTRAVLLER GRVRLADFTK PVIQMYLDKA KNAISAWSCS TSIPDFDGIF FESISIVNKD RKIAEVLPSN EPFSITLVVN ATASLKGVQI AIRITNEQGI PILTTTNCDK AGKLQEISRG RYRYTVSLPA SFLPPGYYTL IVASFVPGEK LFDGVEDKLG FCIDDMGSLA TLMKDGRLGV VTPLMPWDEV RL
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