| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1501 |
|---|
| Symbol | |
|---|
| ID | 2686023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 1646403 |
|---|
| End bp | 1647314 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637126177 |
|---|
| Product | ABC transporter, ATP-binding protein |
|---|
| Protein accession | NP_952552 |
|---|
| Protein GI | 39996601 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.505204 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTACGT TCATCAATGG TGAGACAGCA GGTGCGTCTG CTATTGCAAT AGACAGCATC
TCTAAGACCT ATATCGGTAA AAAGAGAGTT CGAGTTGAAG CGCTGAAAGA TGTTTCACTG
ACAGTGGGGC TCGGCGAGGT CTTTGGTTTC CTTGGGCCGA ACGGCGCGGG GAAGAGCACC
ACTATTAAGT GCCTTGTGGG CCTCATGCGT CCAACAAAGG GAACTGCTAC GATAATGGGA
GAAAGCATCC CATCAATTGC TTCACGGCGC AACATCGGGT ATTTGCCCGA AAATCCCTCG
TTCTATGATT ACCTCTCTGC GGAGGAGTAT ATACGCTTTG TTGGGTCGGC ATTCCAGATG
CCGGCCGACG AATTGACTCG GAAGAGCGAG GAAGTTCTTA AGCTGCTTGA GCTTTGGGAT
GCCCGCAAAC GTCCAATCCG GAGCTATAGT AAAGGAATGG TCCAGCGCGT TGGTCTGGCC
CAAGTGCTCG TTCACGATCC TGATGTGTAT ATCCTGGATG AGCCCATGAG CGGACTTGAC
CCTTTGGGGC GTTCGCTGGT GAAGGAGATT ATCAGTGACC TGAAGAGGCG GGGGAAAACG
GTATTTTTCA GCACTCATAT TATTGATGAT GTTGAAAAGA TTTGCGACCG CGTCGGGATT
ATTTCCGGTG GGGTTTTGAA AAGCGTCGAG CATGTTGACA GAATATTGGA ACAAGGAGTG
ACGGGCTACA CAATAACAGC CCAGAATGAC AAAGGAGAAA CTCTAATCCT TTCTGTAGAT
CGTGACGGAT TGGGTGACAA GCTGACATCC TTGGCCACGG TAGGTTGTAC TGTGTCTCTC
ATAGAACCTG TCAGAAAAAA TCTCGAGAGA TTTTTTCTCG ACATCATTAA AGAGTCTAAC
GGGCCGGAAT GA
|
|---|
| Protein sequence | MGTFINGETA GASAIAIDSI SKTYIGKKRV RVEALKDVSL TVGLGEVFGF LGPNGAGKST
TIKCLVGLMR PTKGTATIMG ESIPSIASRR NIGYLPENPS FYDYLSAEEY IRFVGSAFQM
PADELTRKSE EVLKLLELWD ARKRPIRSYS KGMVQRVGLA QVLVHDPDVY ILDEPMSGLD
PLGRSLVKEI ISDLKRRGKT VFFSTHIIDD VEKICDRVGI ISGGVLKSVE HVDRILEQGV
TGYTITAQND KGETLILSVD RDGLGDKLTS LATVGCTVSL IEPVRKNLER FFLDIIKESN
GPE
|
|---|
| |