Gene GSU1492 details

Gene Information

• Locus tag: GSU1492
• Symbol: pilT-4
• ID: 2686124
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 1636677
• End bp: 1637774
• Gene Length: 1098 bp
• Protein Length: 365 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637126168
• Product: twitching motility protein PilT
• Protein accession: NP_952543
• Protein GI: 39996592
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT
• TIGRFAM ID: [TIGR01420] pilus retraction protein PilT

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.144768
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAACA TGCATCAACT CCTCACGGAA CTCGTCAATC GCGGGGGCTC GGACCTTCAC 
ATCACCACTA ACTCGCCCCC GCAGATCCGG GTCGACGGCC AGTTGATCCC TCTCGAGATG 
CCACCGCTCA ATGCGGTGGA CACCAAGCAG CTCTGCTACA GCATCCTTAC TGAGCAGCAG 
AAGCACAAAT TCGAGGAAGC CAACGAACTC GACCTTTCCT TCGGCATCAA GGGGCTTTCC 
CGTTTCCGGG GGAACGTGTT CATTCAGCGG GGCGCAGTTG CCGGCGTGTT CCGGGTGATT 
CCCTACAAGA TTCTCACCTT TGAAGAGCTG GGTCTGCCGG TGGTGGTGAA AGAGCTGGCG 
GAGAAGCCTC GGGGGCTGAT CCTCGTTACC GGACCCACCG GCAGCGGCAA GTCGACCACC 
CTGGCCGCCA TCATCGACAA GATCAACACC GAACGGCACG ATCATATTGT GACCATCGAG 
GATCCCATCG AGTACCTGCA TCCTCACAAG AGTTGCGTGG TGAACCAGCG TGAGGTGGGG 
GCCGATACGA AAAGCTTCAA GAACGCCTTG AAATATATCC TGCGCCAGGA TCCGGACGTG 
GTCCTCGTGG GGGAGCTCCG GGATCTGGAG ACCATCGAGG CGGCCCTGAC CCTTGCCGAG 
ACCGGTCACC TCTGTCTCGC CACGCTCCAC ACAAACTCGG CGGTGCAGAC CATCAACCGG 
ATCGTGGACG TATTTCCCCC CTACCAGCAG CCCCAGGTCC GTGCCCAGCT TTCTTTCGTT 
CTGGAAGGGG TCATGTCCCA GACCCTGCTG CCGAACGTAT CGGGCAAGGG GAGGGTGCTG 
GCCCTGGAGG TGATGGTGCC CAATCCGGCC ATCCGTAACC TGATCCGCGA AGACAAGATC 
CACCAGATCT ATTCCCAGAT GCAGGTGGGG CAGGAGAAGT TCGGCATGCA GACCATGAAC 
CAGTCGCTGT TCAGTCTGTT GCAGAAGAGA CGGATTTCGC TTGATGTGGC CATGGCCCGC 
TCGTCCGATC CCGACGAACT CAAGCAGATG CTGGCCAGCG CCCAGCGGCC ACCGGGTCAG 
CGCCCTCAGA TGAGGTAA 

 

Protein sequence

MANMHQLLTE LVNRGGSDLH ITTNSPPQIR VDGQLIPLEM PPLNAVDTKQ LCYSILTEQQ 
KHKFEEANEL DLSFGIKGLS RFRGNVFIQR GAVAGVFRVI PYKILTFEEL GLPVVVKELA 
EKPRGLILVT GPTGSGKSTT LAAIIDKINT ERHDHIVTIE DPIEYLHPHK SCVVNQREVG 
ADTKSFKNAL KYILRQDPDV VLVGELRDLE TIEAALTLAE TGHLCLATLH TNSAVQTINR 
IVDVFPPYQQ PQVRAQLSFV LEGVMSQTLL PNVSGKGRVL ALEVMVPNPA IRNLIREDKI 
HQIYSQMQVG QEKFGMQTMN QSLFSLLQKR RISLDVAMAR SSDPDELKQM LASAQRPPGQ 
RPQMR