| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1491 |
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| Symbol | |
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| ID | 2686142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 1634843 |
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| End bp | 1636549 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637126167 |
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| Product | type IV pilus biogenesis protein PilB |
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| Protein accession | NP_952542 |
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| Protein GI | 39996591 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E
[TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.10563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGCTA GCAGACTGGG AGAACTCCTG GTTCGAAACA ATATCATCAC CAAGGAACAG
CTTGCCAAGG CACTGGACGA GCAACGAACC TCCGGCGGCC AACAGCGCCT TGGCTCCATC
CTCGTCAAGA ACGGCCTTGT CACTGAGCCC GATCTCACCA CGTTCCTCTC CAAGCAGTAC
GGTGTCCCCT CCATCAATCT GAGTGAATTC GAAGCCGATA TGGCGGTGGT CAAGATCATC
CCCGCCGACG TGGCCCAGAA GTACCAGATC GTCCCGGTGA ACAGGGCCGG TTCGACCCTG
ATCATTGCCA TGGCTGACCC GTCGAACATC TTCGCCATCG ACGACATCAA GTTCATGACC
GGCTACAACG TGGAGGTGGT CGTCGCTTCC GAGTCGTCCA TCAAGACTGC CATCGACAAG
TACTATGACC AGTCAGCGTC TCTGGCCGAC GTCATGAACG ACCTGGAGAT GGACGATCTG
GAGGTTATCG GCGAGGACGA GGATGTAGAC GTTTCTTCCC TCGAACGGGC GACCGAGGAT
GCGCCGGTCG TCAAGCTCGT GAACCTGATC CTCACCGACG CCATCAAGAA GAAGGCGAGT
GATATCCATA TCGAGCCCTA TGAGCGGACC TTCCGGGTGC GCTATCGGAT CGACGGCGTC
CTCTACGAAG TCATGAAGCC CCCCCTGAAA CTGAAAAACG CCATCACGTC GCGGATCAAG
ATCATGGCTG ACCTGGATAT TGCCGAACGG CGGCTTCCCC AGGACGGCCG CATCAAGATC
AAAATGGGTG GCGGGCAGGA CATGGACTAC CGGGTGTCGG TCCTGCCGAC CCTGTTCGGC
GAGAAGGTGG TTCTGCGACT CCTGGACAAG TCGAACCTCC AGCTCGACAT GACCAAGCTG
GGCTACGAGC CCACGGCGTT GAGCTACTTC AAGGAGGCGA TTCACAAGCC CTTCGGCATG
GTGCTGGTGA CCGGACCCAC GGGGAGCGGC AAGACGGTTT CCCTCTATTC GGCGCTTTCC
GAGCTCAACA AGACTACCGA GAACATCTCC ACGGCCGAAG ACCCGGTGGA GTTCAACTTC
GCCGGCATCA ACCAGGTGCA GATGCACGAA GATATCGGTC TTACCTTTGC CGCCGCGCTC
CGCTCCTTCC TGCGTCAGGA CCCGGACATC ATCATGATCG GAGAGATCCG GGACTTCGAG
ACGGCCGAGA TCGCCATCAA GGCTGCGCTT ACCGGTCACT TGGTTCTCTC TACCCTTCAC
ACCAACGATG CCCCGGCCAC CATCAACCGG CTGTTGAACA TGGGGGTCGA GCCGTTTCTT
GTTGCCTCGG CGGTGAACCT GATTACCGCC CAGCGTCTTG CCCGGCGGGT CTGCTCCGAG
TGCAAGGCCG TGGAGGAGAT ACCGATCCAG GCTTTGATCG ATGCAGGCGT CCCTCCCGAG
GAAGCTCCTG AATATGTCTG CTTTCGCGGC ACCGGTTGTG CCAAGTGCAA CAACACCGGC
TACAAGGGGC GCGTCGGCTT CTATCAGGTA ATGCCCATGC TGGAGGAAAT CAGGGAGCTG
ATTCTCAACG GCGCCAATAC GGCCGAAATC AAACGCGAAT CCATGCGCCT GGGCATCAAG
ACCATGCGCC AATCGGGCCT GACCAAACTC AAGGAGGGGG TTACCTCCTT TGAGGAGGTG
CTACGGGTTA CCGTGGCTGA CGACTAA
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| Protein sequence | MQASRLGELL VRNNIITKEQ LAKALDEQRT SGGQQRLGSI LVKNGLVTEP DLTTFLSKQY
GVPSINLSEF EADMAVVKII PADVAQKYQI VPVNRAGSTL IIAMADPSNI FAIDDIKFMT
GYNVEVVVAS ESSIKTAIDK YYDQSASLAD VMNDLEMDDL EVIGEDEDVD VSSLERATED
APVVKLVNLI LTDAIKKKAS DIHIEPYERT FRVRYRIDGV LYEVMKPPLK LKNAITSRIK
IMADLDIAER RLPQDGRIKI KMGGGQDMDY RVSVLPTLFG EKVVLRLLDK SNLQLDMTKL
GYEPTALSYF KEAIHKPFGM VLVTGPTGSG KTVSLYSALS ELNKTTENIS TAEDPVEFNF
AGINQVQMHE DIGLTFAAAL RSFLRQDPDI IMIGEIRDFE TAEIAIKAAL TGHLVLSTLH
TNDAPATINR LLNMGVEPFL VASAVNLITA QRLARRVCSE CKAVEEIPIQ ALIDAGVPPE
EAPEYVCFRG TGCAKCNNTG YKGRVGFYQV MPMLEEIREL ILNGANTAEI KRESMRLGIK
TMRQSGLTKL KEGVTSFEEV LRVTVADD
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