Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1459 |
Symbol | ispG |
ID | 2686219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1598892 |
End bp | 1599953 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637126133 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | NP_952510 |
Protein GI | 39996559 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0367396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCCA AGACGAGACA GATCCGAGTG GGGAACGTAC CGGTGGGCGG CGATGCGCCC TGCTCGGTGC AATCCATGTG CAATACCGAT ACGCGGGACG CGGGCGCCAC CCTTGATCAG ATCAACGCCC TGGCGGCTGC GGGCTGTGAA ATCGTCCGCT GCGCCGTCCC CGACATGGCC GCTGCCGAGG CCTTGGGCGC CATCAAGCGC CAAAGCCCCA TCCCGGTTAT TGCCGACATC CACTTTGACT ACAAACTTGC CCTGAAGGTA CTGGAGGGGG GAATTGACGG CCTGCGTCTC AATCCCGGCA ATATCGGCGA ACGGTGGAAG GTGGAAGAGG TTGTAGCAGC GGCCCGGGAA CGGCTGGTAC CCATCCGCAT CGGCGTCAAT GCCGGCTCTC TAGAAAAGGA GCTTCTTCAG AAATACGGCC ACCCGACCGC CGAGGCCATG GTCGAGTCGG CCCTTGGCCA TGTGCGTATT CTCGAAGAAC TCGGCTACGA TCAGATCAAG ATATCTCTCA AGGCATCGGA CGTACCCAAG ACGGTGGCGG CTTACCGGCT TCTGGCCCAA CGGATCGACT ATCCGCTTCA CATCGGCATT ACCGAAGCGG GCACTATGTT CTCCGGAACC ATCAAGTCAG CCGTGGGGCT TGGCATCCTG CTTGCCGACG GCATCGGCGA TACGCTCCGG GTATCCCTCA CGGGTGATCC GGTGGACGAG GTGCGGGTCG GCTTCGAGAT CCTCAAGGCG CTTAATCTCA GACAAAAAGG GATTAATCTT GTCTCCTGCC CCACCTGCGG CCGTTGCCAG ATCAACCTCA TCGGGGTGGC CGAAGAGGTT GAGAAGCGTC TCGCCGGCAT CGACGCCCAT CTCACCGTGG CGGTCATGGG ATGCGTCGTG AACGGACCCG GCGAGGCCCG CGAGGCCGAC GTGGGGATTG CCGGCGGACG GGGCGAGGGG CTCCTGTTCC GCAACGGGGA AATCGTCCGC AAGGTGCCGG AGGCCGACAT GGCCGATGCG CTGATTGCGG AAGTCGAAAA GATACTCGCT GAAAAACACT AA
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Protein sequence | MKAKTRQIRV GNVPVGGDAP CSVQSMCNTD TRDAGATLDQ INALAAAGCE IVRCAVPDMA AAEALGAIKR QSPIPVIADI HFDYKLALKV LEGGIDGLRL NPGNIGERWK VEEVVAAARE RLVPIRIGVN AGSLEKELLQ KYGHPTAEAM VESALGHVRI LEELGYDQIK ISLKASDVPK TVAAYRLLAQ RIDYPLHIGI TEAGTMFSGT IKSAVGLGIL LADGIGDTLR VSLTGDPVDE VRVGFEILKA LNLRQKGINL VSCPTCGRCQ INLIGVAEEV EKRLAGIDAH LTVAVMGCVV NGPGEAREAD VGIAGGRGEG LLFRNGEIVR KVPEADMADA LIAEVEKILA EKH
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