| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1458 |
|---|
| Symbol | |
|---|
| ID | 2686225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 1597229 |
|---|
| End bp | 1598803 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637126132 |
|---|
| Product | TPR domain-containing protein |
|---|
| Protein accession | NP_952509 |
|---|
| Protein GI | 39996558 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.726847 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGA CGATCATCCC GGCAGTCATG CTCGTGGTGA TGCCCTGTGC GGCACTGGCT
TCGGCGCCAG CCGACCTGTT CCGGGGCGGG AAGATAGACG AGGCGGTGAC AGCCTATCGC
GCCACCATCG GCCAAGCCTC CGCGGCACGG GAAAAGGCGA TGCTCCACAA GGAGTTGGGC
GATCTGTACG CAGAAAAAGA TCAGTATGCC GAAGCAGCTG ATGAGTACGT CGCGGCTCTG
GCGCTCGACC ACGGCTTTCC AACGACTGAA CGGATCAGGA TGGCAGTGGC CGTTTCGTGG
GCCAACCGGC TGGACGATGC GATCTTCGCG TTGCGCGCCG TGGTTGCCGA CGAACCGGAC
AACACCACTG CCCGGACCCA TCTGGCCCGA ACCCTGTCCT GGCGTGGTGA TCAGCCCGAT
GCCATTGCCG AGGCCGATCG TGTCCTAGCA GCTCGACCCG GAGACCGGGA TGCGCTTCTG
GTCAAGGCAA ACGCCCTCCG TTGGCAGGGT AACAGTAGCC AGGCCCTGCC GCTCTACCAA
CAGATCCTGG CGGGGAGTGA CGACTTCGAT ACCCGCCTGG GTCTTGCCTT TGCCCAGCTC
CAGACCGGCA ACAAGCAGGA GGCAACCGCC AATGCCGCCA TCCTCAAGCC CCGATTCCCC
TACCAGGAGC GGGACTTGAA GAGACTCCGG GAGGAAATCG AAAATACCAC CGCTAATACG
GTCGAGGCGT CATACACTCG CTACGGTGAT TCGGACGACA ACAAGGCGGA CCGTTTCGGC
GTTGCCTACA CCCATCGCCA GGGTGACTGG AGCCTCTCCG GTTCCTACCG CCACTTCACG
GTAAACGATA CCGTCGGCGA CACCTATGCC GACATCCTCG ATGCGGGCGG TTATCTGCGC
CTGGCCGGCC GCTACGGTGT CGGCGCCGGT ATCGGCGTGG CTCGTTTGGA CAGCGGCTCA
TCCGACATGA ACCTGACCTG GCGCCTCAAC GCCGACGCCG ATGTAGCGCG AGGCGGTGTA
AGTCTTTCCC TGCGCAAGGA CGTTCTCACC GACACCGCAT CCCTGGTGGA GAACCGGATC
AGATACCTCT CCGCCGGCAT CAGCGCCAGC CAGCGCATCA CCCAGCGCTT TACCCTGTTC
GGCGGTTACT CCTGGCGCGA CTACTCCGAC GACAACAGCG CCCATGACCT GCTTATCGCT
CCGTCCTATA CCCTCTACAC CGGCGACCCC ACGGTGCGGA CCGGCTACCG CTTCCGATAC
CTCAATTTCG ACCGCCAGAG CTTCGGCGGC TATTTCGATC CGAACGACTT CATATCTCAC
CAGCTTTTTG TCTCCGTCGA CTGGCAACTC GACCGCATCT TCCTCTATGC GGAGCCCTAT
GGCGGATTCC AGTCCTTCGA CCGCTACGGC GATCACACCG ACGATATCTT CGGCGGCTTC
AGCGGCACCC TCGGCTACCG CTTTACCAAG CGCCTCACGG GTGAGGTGAA CGGGGAGCTC
GGCAACTACG CCCTCGGCGC CACCTCCGGT TTCGAGTACT ACTCCGTCGG AACCCGCTTC
GCCTATTCCT TCTGA
|
|---|
| Protein sequence | MTKTIIPAVM LVVMPCAALA SAPADLFRGG KIDEAVTAYR ATIGQASAAR EKAMLHKELG
DLYAEKDQYA EAADEYVAAL ALDHGFPTTE RIRMAVAVSW ANRLDDAIFA LRAVVADEPD
NTTARTHLAR TLSWRGDQPD AIAEADRVLA ARPGDRDALL VKANALRWQG NSSQALPLYQ
QILAGSDDFD TRLGLAFAQL QTGNKQEATA NAAILKPRFP YQERDLKRLR EEIENTTANT
VEASYTRYGD SDDNKADRFG VAYTHRQGDW SLSGSYRHFT VNDTVGDTYA DILDAGGYLR
LAGRYGVGAG IGVARLDSGS SDMNLTWRLN ADADVARGGV SLSLRKDVLT DTASLVENRI
RYLSAGISAS QRITQRFTLF GGYSWRDYSD DNSAHDLLIA PSYTLYTGDP TVRTGYRFRY
LNFDRQSFGG YFDPNDFISH QLFVSVDWQL DRIFLYAEPY GGFQSFDRYG DHTDDIFGGF
SGTLGYRFTK RLTGEVNGEL GNYALGATSG FEYYSVGTRF AYSF
|
|---|
| |