Gene GSU1457 details

Gene Information

• Locus tag: GSU1457
• ID: 2686226
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 1596512
• End bp: 1597225
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637126131
• Product: polysaccharide deacetylase domain-containing protein
• Protein accession: NP_952508
• Protein GI: 39996557
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0726] Predicted xylanase/chitin deacetylase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.645637
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGTCC CACTGCCGGT CTCGGCCCGG AAGGACACGG TGGTGCCGGT GCTCATGTAC 
CACGATGTCT CCAACCATTT CCACGATCCC TTTACCATCT CACCCGCGCT CTTTGCCGCC 
CACATGGAGT GGCTCCATGC TGCCGGCTAC CGGGCCGTGA CGGTGGGGGA AGCCCTGGCC 
GGGCGGGGAG CCACTGCCGG CAAAATGGTG GTTATCACGT TTGACGACGG CTATGCCTCG 
TTTCTGGACT ATGTCCATCC GCTTCTGCTT CAGTATGGCT TCTCGGCCGC AATTTCGGTC 
ATCGGCAGTC ATGTGGGGAC CTGGCTGGAG CGGGATGGCC GCCGGCCCAT GCTGAGCTGG 
GACGAGTATC GCTATCTGGC GGCGCGGCGA GTGGAGGTAG GGTGCCATGC CTATCATCTC 
CACGCCATCG AGCGGTTGCG GCATGCCTCG GCCGACGAAT TGGCTGAAGA TCTGGAGCTC 
TTTCAGAAGA CCATGGCGCG GGAGATGGGG CGGCGGGCTA CGCTTCTGGC CTGGCCCTAC 
GGAATCTACA CGTCCGAGCG GGTTCAGATT GCCCGGCAGG CCGGATTTGT GCACATTCTT 
ACCTCCAACG AGGGATATGT GGATGACGGC ACCGATCCGG GGGCGATCCC GCGGCTCAAT 
ATCGATAATC GGCTTGACCT TGTTTCGTTC AGTAATTATC TCAGGGGGGA ATGA 

 

Protein sequence

MAVPLPVSAR KDTVVPVLMY HDVSNHFHDP FTISPALFAA HMEWLHAAGY RAVTVGEALA 
GRGATAGKMV VITFDDGYAS FLDYVHPLLL QYGFSAAISV IGSHVGTWLE RDGRRPMLSW 
DEYRYLAARR VEVGCHAYHL HAIERLRHAS ADELAEDLEL FQKTMAREMG RRATLLAWPY 
GIYTSERVQI ARQAGFVHIL TSNEGYVDDG TDPGAIPRLN IDNRLDLVSF SNYLRGE