Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1445 |
Symbol | |
ID | 2687799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1582943 |
End bp | 1584724 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637126119 |
Product | TonB-dependent receptor, putative |
Protein accession | NP_952496 |
Protein GI | 39996545 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTACG AGGACAAGGA ACTGGTTGTG ACCCCCACCC GGGACCCCAA GCCCGTCTCT CAGGTGGCCG AAAACATTAC CGTCATTACC GCCAAAGAAA TCAGGAACCT GAATGCCCAT ACCCTGGCAG ACGTTCTGGT CACCATAACC GGTGTCCAGC AAGACTGGCG GGGTGGTCCC GGCAGTCTCG CCTTCCCCGG TATCCAGGGG TCGAACCCCA ATCAGGTACT CGTTCTGATC GATGGGGTCT CGCAGACCAG TACCTCTTCA AACTTTGCCG ATGTGGGCGC TATCCCGGTG CAGAATATCG AGCGGGTCGA GATCATCAAA GGACCAGCCT CCACCTCCTG GGGGTCGTCC CTTGGCGGCA TCATCAACGT CATCACCAAG TCCCCCGAGG AGAACAGGGC CGCGGCCGGC ATGGTGTCGG CGTCTCTGGG TGAGCGGTTC ACCGGCGACT ACCGGGGCGA ACTCACCGGC ACGGTGGGAT CGTTCGGCTA TTATCTCTCG GGCGGCAAGC TCCACTCCGA CGGACTCCTT CCCCACAACA GCGTTGATAC CGACCGGGCA TATCTGAAGC TGACCCACCA GTTGCCCGAC GGCGGAGATC TACGCTTCTC TCTCGGCTAC AGCGCCGGCG ACCGCGGCGA CCAAATGGAC CCCGTTGCTC GAACGTCCTA TGACAATACG TTCGACAATC TGTTGACGAC GCTCTCAATC TCGCTCCCCC TTACCGAGCG GATCGACTGG GACCTTTCGC TCCGCTCCCA GTGGCTGGAA TATGACCAGT TTCGCAATGG TCTCGACACC GGACTCGTTG ATGCCTCGCT GCTGGATGAC CGTTCCTTCG GAGCCACAAC CAAGCTTGTC TGGCGTACCG GTGACCACAG CCTGACTGTC GGGGCGGAGT TTGACAGGGG TGATTTCAGG CTGGAACAGG AGAGCTCTGG AATTGGACGG TCTTCTGTCC GTTCACATAT TGCAAAATCG GCAATCTTTG CCAACGACAC CATTGTGTTT GGGCCTTTGA CCATAACCCC GGGCATCCGT TTTGATCACA CGACCACCAA TGGGGACTTT CTGAGCCCCA GTCTTGGGGT GACCTGGGGC ATTGGTGAAC ATACGGTGCT ACGTGGCGCA TTGGCGAGGG GGTTCACGGT CCCTCCCGTT ATTTACACTG TCGGTGATGG CTTTGCCCTG GCCCCTAACC CCGACCTTAA GATGGAAAAG GTTCTTTCCT GGCAGGCAGG CTTCGAGACA TCGCTCCTGC GCTACCTGTG GCTCAAGTCT ACTTTTTTTC TGCATGATGT TTCTGATGCT GTTGTTGCTA CCATTTTGTC AGATGGGCAG TTTCGGTATG AAAATCGAGA AAAGCAGCGC CGACAGGGTA TGGAGATCGA GGTCAAGACC ATTCCTTTTA TGTACACTAC GCTGGGAGCC GGTTATACCT TTGTGGATTC GAAAGATCGG AACACGCATC AGCGAATACC CTCGGCGGCT CGGCAGACGG TCAATACAAC CATACAGTTC GATGACTTAA AGGGTACAAG GGCGAACCTT GTGGGGCGCT ACATCTGGTG GAATGCTCCT GATTTCATCC AAGGTAGCTA TACCTCAATG GTCTGGGATC TGAATGTTGC CCGAAATATC TATCGTGATG AACGTTACAG TGTGGAGTTG TTCCTAGCTG GCCGCAATCT GTTTAATGGT TCACAGTATG TTGACGCCAC CCTCAAAAAC CCCTGCCGCT GGTTCGAGGG AGGGATACGG TTCGATTTTT GA
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Protein sequence | MFYEDKELVV TPTRDPKPVS QVAENITVIT AKEIRNLNAH TLADVLVTIT GVQQDWRGGP GSLAFPGIQG SNPNQVLVLI DGVSQTSTSS NFADVGAIPV QNIERVEIIK GPASTSWGSS LGGIINVITK SPEENRAAAG MVSASLGERF TGDYRGELTG TVGSFGYYLS GGKLHSDGLL PHNSVDTDRA YLKLTHQLPD GGDLRFSLGY SAGDRGDQMD PVARTSYDNT FDNLLTTLSI SLPLTERIDW DLSLRSQWLE YDQFRNGLDT GLVDASLLDD RSFGATTKLV WRTGDHSLTV GAEFDRGDFR LEQESSGIGR SSVRSHIAKS AIFANDTIVF GPLTITPGIR FDHTTTNGDF LSPSLGVTWG IGEHTVLRGA LARGFTVPPV IYTVGDGFAL APNPDLKMEK VLSWQAGFET SLLRYLWLKS TFFLHDVSDA VVATILSDGQ FRYENREKQR RQGMEIEVKT IPFMYTTLGA GYTFVDSKDR NTHQRIPSAA RQTVNTTIQF DDLKGTRANL VGRYIWWNAP DFIQGSYTSM VWDLNVARNI YRDERYSVEL FLAGRNLFNG SQYVDATLKN PCRWFEGGIR FDF
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