Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1414 |
Symbol | |
ID | 2686303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1551250 |
End bp | 1553784 |
Gene Length | 2535 bp |
Protein Length | 844 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637126088 |
Product | sensory box histidine kinase/response regulator |
Protein accession | NP_952466 |
Protein GI | 39996515 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00865388 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGCTTT CCTTACGGGC ACTCGTGGGC AGGAAGTGCT ATTCCGTACG GGGGATGGGC GTTCCGTGCC GCAACTGCCC GGCGGCTATC GCCGTGGAGG CCGGCACGCC TTCTGACGCG GAGTTGATCC AGCCCCGTCC GGAACACTGC CCGGGACCGC CGGGGACGTG GCTGACAACG GCTTCGCCGC TACGGGATGA CAACGGTGCC GTTGTCGGCG TAGTGGTGCT GACGTTTAAT GGAGTGCAGA CCGGGGCTTC AGACGAGCGG CTGCGTCTGT TCACGGAGCA TGCGCCTGCC GCCCTTGCCA TGTTCGACCG GGAGATGCGG TATCTTGCCG TGAGCCGGCG CTGGCGCGAA GACTACGGTC TTGGAGACGG CGATATTCTC GGCATGTCTC ACTATGATAT CTTCCCGGAA ATCGGAGAAG AGTGGAAGTC CGTGCATCGC CGCGGCCTCG CGGGGGAAGT TATCCGCGTC GAAGAGGATT GCTTCGTGCG GGCTGACGGC CGAACTCAGT GGCTGCGATG GGAAGTGCGT CCCTGGTACG AGGGGGAAGG CCGAGTGGGG GGCGTCGTCA TTTTTACCGA AGACATCACC AGAGCCAAGG TGTCCGAACG CGAATTGCGT CTGGCGCGGT TCTGCATGGA CGAATCGGCC ATTGCCATCT TTTCGGTGGC CGAGAATGGC CGCATTATCG ATGCGAACCG TCGAGCCTGC GAGGGGCTCG GCTATTCACG GGACGAGCTC TGCTCCCTGA CGGTCTTCGA TATTGACCCG ACGTTCAGCG ATGATAGTTG GCTCAGGCAC CGGGCGAACA TCCGCGAGCG CGGCTCCGGT ACCATAGAAA CCCTCCACCG GCGCAAGGAC GGTAGCGTTT TCCCGGTCGA GATCACTGTC ACCTATCTCG ATTTCGAAGG AGAACGGTTC TCTTTCTCCT TTGCCCATGA CATCACCGAG CGTAAGCAGG CCGAGGCTGC CGTGCGGGAG AGCGAGGAAA AATTCCGGAA CATTTTCCAG GATCATGCCG CGGCAAAGCT GATCATTGAC CCAGAAAGCG GCGCCATCGT CGATGCCAAC AATGCTGCAG CGCTCTTTTA CGGCTGGTCT GTGGCCGAAC TGTGCGGCAT GAAGATTTCC AAAATCAACA CCCTTCCTTT CTCGCAGGTG AAAGAAGAGA TGGACAAAGC CCGGAATTCC GGGAATACGC GGTTCGAATT CCAGCATCGA AAGGCTGACG GCAGCATTGT CGATGTCGAG GTCTACAGCA GCAAAGTCCG CATCGGAGGC AAGGAGTACC TGCATTCGAT CATTCACGAC ATCACCGAAA AACGCAAGCT GGGAGACCAG CTCCGGCAGG CCCAGAAGAT GGAGTCAATC GGTACCTTCG CGGGAGGTGT CGCTCACGAT TTCAACAACA TCCTTACGGT TATCACGGGG TGCGGTTCAA TGCTGCGACT GAAGCTTGAG CAGCACCCCC AGTTCCTGCC CCTGCTCGAT CAGATCCTCA AATCATCTGA AAAAGCGGCA ACCTTGACGC GAAGCCTCCT GGCATTCAGC CGCAAACAGG TCATCGTACC GAAACAGCAT GATTTGGCGG AAATTGTTGC GGATATGGAG AAATTCCTCC AACGGATCAT CGGAGAAGAT ATCGATTTGA AATTCTCCCT GCCGAGCTAC GGATTGCCGG TTTCCGTGGA CCAGGGCCAG ATTGAGCAGG TCATCGTCAA TCTGGCGGCC AACGCTCGCG ATGCCATGAC GGAAGGTGGG ATGCTGGCCA TAGGCGCGGA CATGGTGCGG CTCGACACGA TTTCAGCGTC CCTCCACGGC TGCCGTCCGG GAGACTATGC CCTGCTTACC GTTACCGACA GTGGGATCGG CATGGATGAC GCAACAAAGG AGAAAATTTT CGATCCCTTC TTCACAACCA AGCCGGTCGG CAAGGGGACG GGCCTCGGTC TGGCCATGGT TTACGGCATC ATCAAGCAGC ACGATGGGGT GATTACGGTT TATACCGAGG TGGGAAGGGG TACCACATTC CGGATTTATC TTCCCCTGGC AGCCGGTGCG CGGGAGCATG CCGATGCGAC GCCGGTTTTC CCGGGGGGAA ACGAAACCAT TATGCTCGTG GAGGATGATG AATCCGTGCG AACCACCACG GCGGATATTC TGACAATGTT CGGCTACCGT GTTGTGACCG CGGGGGACGG GGCAGAGGCC ATCGAACGGT ATCGTGCGAC CGGAGAGGAT ATAGCCTTGG TGATTCTTGA CGTCATCATG CCGCGGATGA ATGGCCGCCA GGTCCATGAC GAGCTCCTAA AGATCAACCC GGCTGTGAAG GTCGTCTATA CGAGCGGCTA CACTGCCGAT CTGATCGAGA ACAAAGGAGT TCTCGACGCC GGTATCCAAT TCGTTCCCAA ACCGCTCCTC CCCCAGGACA TTCTCACGGC AATCCGTCGG GTGCTGGATG GCCGTGAGGT GCTGCCAAGC CTGCATCATG AGCATGAGCC GGCCGAGGTA GAACCTCAGT CGTAG
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Protein sequence | MELSLRALVG RKCYSVRGMG VPCRNCPAAI AVEAGTPSDA ELIQPRPEHC PGPPGTWLTT ASPLRDDNGA VVGVVVLTFN GVQTGASDER LRLFTEHAPA ALAMFDREMR YLAVSRRWRE DYGLGDGDIL GMSHYDIFPE IGEEWKSVHR RGLAGEVIRV EEDCFVRADG RTQWLRWEVR PWYEGEGRVG GVVIFTEDIT RAKVSERELR LARFCMDESA IAIFSVAENG RIIDANRRAC EGLGYSRDEL CSLTVFDIDP TFSDDSWLRH RANIRERGSG TIETLHRRKD GSVFPVEITV TYLDFEGERF SFSFAHDITE RKQAEAAVRE SEEKFRNIFQ DHAAAKLIID PESGAIVDAN NAAALFYGWS VAELCGMKIS KINTLPFSQV KEEMDKARNS GNTRFEFQHR KADGSIVDVE VYSSKVRIGG KEYLHSIIHD ITEKRKLGDQ LRQAQKMESI GTFAGGVAHD FNNILTVITG CGSMLRLKLE QHPQFLPLLD QILKSSEKAA TLTRSLLAFS RKQVIVPKQH DLAEIVADME KFLQRIIGED IDLKFSLPSY GLPVSVDQGQ IEQVIVNLAA NARDAMTEGG MLAIGADMVR LDTISASLHG CRPGDYALLT VTDSGIGMDD ATKEKIFDPF FTTKPVGKGT GLGLAMVYGI IKQHDGVITV YTEVGRGTTF RIYLPLAAGA REHADATPVF PGGNETIMLV EDDESVRTTT ADILTMFGYR VVTAGDGAEA IERYRATGED IALVILDVIM PRMNGRQVHD ELLKINPAVK VVYTSGYTAD LIENKGVLDA GIQFVPKPLL PQDILTAIRR VLDGREVLPS LHHEHEPAEV EPQS
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