Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1403 |
Symbol | rluB |
ID | 2686343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1544951 |
End bp | 1545694 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637126077 |
Product | ribosomal large subunit pseudouridine synthase B |
Protein accession | NP_952455 |
Protein GI | 39996504 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.645637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAC GATTGCAGAA GCTGCTGTCC CAGGCGGGGG TCGCGTCCCG GCGCGAGGCG GAACGGTTCA TCACCGAGGG ACGGGTGGCG GTGAACGGCA CGGTCGTTAC CGAGCTGGGG AGCAAGGCCG ACCCGGAGCG GGACCGGATA ACCGTGGACG GGCAGCCCGT CCGTCCGGCG GAGAAGAAGG TGTATCTCAT CCTCAACAAG CCCGTGGGCT ATATGACCAC CCTCAGGGAT CCGGAGGGGA GACCCATTGT CACCGATCTC CTCAAGGGGC TCGATGTCCG CGTCTTTCCC GTGGGGCGGC TCGACTACAA CACCGAGGGG CTTCTGCTGC TCACCAATGA CGGTGCCTGG GCCAACCGGC TCGCCCATCC CCGGCATGAG GTGGACAAGG AATACCTGGT CCGGGTGCGG GGGGCTGTGG CCAAGGAGCA GATCCGGCGG CTGGCTACCG GTGTGGAACT GGACGACGGG CCGACGGCGC CGGCAAAGGT GGAGGTGTCC AGCCAGAGCG ATAACAACAC CTGGCTTTCC ATCGTGATTC ACGAGGGGCG CTACCGCCAG GTGCGCCGCA TGTGCGAAGC CGTGAGCCTG TCGGTGGTCC GCCTGCGCCG GGTGAGATAC GGCGCGGTCT CGCTCGGCGA CCTGAAACCG GGGGAGTACC GGCCCCTCAG CCCGACGGAG GTTGCAGCCC TGGCCGGCCG CGAAAAACGA GAACAGCGCC GTCGGAAAGC CTGA
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Protein sequence | MEERLQKLLS QAGVASRREA ERFITEGRVA VNGTVVTELG SKADPERDRI TVDGQPVRPA EKKVYLILNK PVGYMTTLRD PEGRPIVTDL LKGLDVRVFP VGRLDYNTEG LLLLTNDGAW ANRLAHPRHE VDKEYLVRVR GAVAKEQIRR LATGVELDDG PTAPAKVEVS SQSDNNTWLS IVIHEGRYRQ VRRMCEAVSL SVVRLRRVRY GAVSLGDLKP GEYRPLSPTE VAALAGREKR EQRRRKA
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