Gene GSU1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1403 
SymbolrluB 
ID2686343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp1544951 
End bp1545694 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content67% 
IMG OID637126077 
Productribosomal large subunit pseudouridine synthase B 
Protein accessionNP_952455 
Protein GI39996504 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.645637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAC GATTGCAGAA GCTGCTGTCC CAGGCGGGGG TCGCGTCCCG GCGCGAGGCG 
GAACGGTTCA TCACCGAGGG ACGGGTGGCG GTGAACGGCA CGGTCGTTAC CGAGCTGGGG
AGCAAGGCCG ACCCGGAGCG GGACCGGATA ACCGTGGACG GGCAGCCCGT CCGTCCGGCG
GAGAAGAAGG TGTATCTCAT CCTCAACAAG CCCGTGGGCT ATATGACCAC CCTCAGGGAT
CCGGAGGGGA GACCCATTGT CACCGATCTC CTCAAGGGGC TCGATGTCCG CGTCTTTCCC
GTGGGGCGGC TCGACTACAA CACCGAGGGG CTTCTGCTGC TCACCAATGA CGGTGCCTGG
GCCAACCGGC TCGCCCATCC CCGGCATGAG GTGGACAAGG AATACCTGGT CCGGGTGCGG
GGGGCTGTGG CCAAGGAGCA GATCCGGCGG CTGGCTACCG GTGTGGAACT GGACGACGGG
CCGACGGCGC CGGCAAAGGT GGAGGTGTCC AGCCAGAGCG ATAACAACAC CTGGCTTTCC
ATCGTGATTC ACGAGGGGCG CTACCGCCAG GTGCGCCGCA TGTGCGAAGC CGTGAGCCTG
TCGGTGGTCC GCCTGCGCCG GGTGAGATAC GGCGCGGTCT CGCTCGGCGA CCTGAAACCG
GGGGAGTACC GGCCCCTCAG CCCGACGGAG GTTGCAGCCC TGGCCGGCCG CGAAAAACGA
GAACAGCGCC GTCGGAAAGC CTGA
 
Protein sequence
MEERLQKLLS QAGVASRREA ERFITEGRVA VNGTVVTELG SKADPERDRI TVDGQPVRPA 
EKKVYLILNK PVGYMTTLRD PEGRPIVTDL LKGLDVRVFP VGRLDYNTEG LLLLTNDGAW
ANRLAHPRHE VDKEYLVRVR GAVAKEQIRR LATGVELDDG PTAPAKVEVS SQSDNNTWLS
IVIHEGRYRQ VRRMCEAVSL SVVRLRRVRY GAVSLGDLKP GEYRPLSPTE VAALAGREKR
EQRRRKA