Gene GSU1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1279 
Symbol 
ID2686550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp1394709 
End bp1395740 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content64% 
IMG OID637125953 
Productcobalamin biosynthesis protein CbiM, putative 
Protein accessionNP_952332 
Protein GI39996381 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0310] ABC-type Co2+ transport system, permease component 
TIGRFAM ID[TIGR00123] cobalamin biosynthesis protein CbiM 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0499926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACATGG CGGATGCGCT TATTTCACCG GCGGTCGGGG GAGTCCTGTG GGCGGCCACG 
GCCGGTACCG TTGCCTGGAG TTGCCGCAGG GTGCGGCAGG AGCTCGATGA GCGGAAGGTG
CCGCTCATGG GTGTCCTCGG CGCATTCGTA TTTGCAGCGC AGATGATCAA CTTCACCATT
CCGGGAACCG GATCCAGCGG GCACCTTGGG GGGGCATTGC TGCTGGCTGT GCTGCTGGGA
CCCCATGCCG CGTTTCTGAC CATTGCATCG GTGCTGGTGG TCCAAGCCCT GTTCTTTGCG
GATGGCGGGC TGTTGGCGCT CGGATGCAAT ATTTTCAATC TCGGCTTCTT TCCCGCGTTC
ATTGCCTATC CCTTCATCTA CCGCGTGATT GCGCCTCCCG GCTCGGGCCA GGGGCGAGTC
ACGGCGGCAT CGCTGGCCGC AGCGGTCACC GGCCTGCAGC TCGGCGCCTT TGCTGTGGTG
CTCGAGACGG TTGCTTCCGG CATTTCGGCG CTTCCCTTCA CCTCCTTTGT GCTTCTCATG
CAACCGATCC ATCTTGCCAT CGGCGCGGTG GAGGGGCTCG TCACCGCGGC GGTGATCGGT
TTCGTGAGCC GTGTTCACCC CGAGATCACC GGTTTGCCCA CGTTCTTTCC GGAACGGGGC
TCCGCTTCCG GCCTCCGGGG GGTACTGCTG ACCCTGGGGG TAATGGCACT GCTCACTGGC
GGTATCGTCT CCTGGTTCGC ATCGGAGAAT CCTGACGGGC TCGAATGGGC CATCAGCCGG
GTGACCGGTT CCGATGAGCT CGCAGCACCC CGCGATGGTT TCCATGGCAC GGCAGCCTCG
ATCCAGGAGA AGGTTGCGTT CCTGCCCGAC TATTCCTTTC CCGCCCCCGC AGTTCATGAT
GTCTCCCATG CTGCCGCCTC AGCCGGCAGC GGCAGGCTCG GTACTTCGGT GTCAGGGGTT
GTAGGGGGGG CGCTGACGCT GGGCGTCGCG TTCCTCATTG GCCTGATCCT GCGCCACCGG
GCGTCTTCGT AA
 
Protein sequence
MHMADALISP AVGGVLWAAT AGTVAWSCRR VRQELDERKV PLMGVLGAFV FAAQMINFTI 
PGTGSSGHLG GALLLAVLLG PHAAFLTIAS VLVVQALFFA DGGLLALGCN IFNLGFFPAF
IAYPFIYRVI APPGSGQGRV TAASLAAAVT GLQLGAFAVV LETVASGISA LPFTSFVLLM
QPIHLAIGAV EGLVTAAVIG FVSRVHPEIT GLPTFFPERG SASGLRGVLL TLGVMALLTG
GIVSWFASEN PDGLEWAISR VTGSDELAAP RDGFHGTAAS IQEKVAFLPD YSFPAPAVHD
VSHAAASAGS GRLGTSVSGV VGGALTLGVA FLIGLILRHR ASS