Gene GSU1253 details

Gene Information

• Locus tag: GSU1253
• ID: 2688138
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 1365114
• End bp: 1367153
• Gene Length: 2040 bp
• Protein Length: 679 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637125927
• Product: hypothetical protein
• Protein accession: NP_952306
• Protein GI: 39996355
• COG category: [S] Function unknown
• COG ID: [COG3391] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR02276] 40-residue YVTN family beta-propeller repeat

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.337339
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGCTT TGATTGATAC GTGGTTTCTC GGGTGCAGGG CGGCTGCGAC AGCCGTCCTG 
TACGTCCTTT TCGCGGTCGT GGCCGGCGGA GCCGTTTCAG CGGCCCGGGC AGCGACCGTC 
GCCGCCTCTG CCCCGGCACC GGTCACGGTC GGGAGCGGAA AGAAGGCCGT GCGCCAGGGC 
ATCAGCCTTG AGCTCCTGGT GAAACCGACC CATGCCGAGG ACGGTTTTTC GGCGGCAGTG 
GTGGAAGGGG CCTATGCGGA TGTCAGCCTG AAGATGACCG ATGCCGCCAC AGGCCACCCG 
GTAACGGTCA TGCAGCCGCG GGTCTGGATC GACCTGCGCA AGGGCACCGG CGATTTCCGT 
GAAAAGCAGA TGGCGTGCTC CGACAAGGTC CGCACCTATC TCCAGGGGAC CCTTTCCTTC 
AGGCCCGACA TCGACCTCAA CAGCTATTTC GTCCTTACCC TCAACAACGA CGCCTCCATT 
TCCGTGATCG ACCCCATCAT CGGGGTTGCC GGCTATTCGC AGCTCTATGC CATGATCCTC 
CTCAAGCGGC CGGGCGAGGA TTGGGTCTTC AGCTTCGACG GCAAACGGCT CTATGTGACC 
ATGCCAAAGG CGGGCGAGGT TGCCGAAATC GACACGGACA GCCTTGCGGT CGTGCGGAAC 
ATCCCAGCCG GCGCCATGCC GGTGCGCATG GCCTTTCAAC CCGATTCGCG CTACCTGTGG 
GTGGGCAATG ATTCCAGCGA CCCAGCCCGG AGCGGCGTCA CCGTTATCGA TCCCTTTTCG 
GGAACGCAGG CGGCTTTCAT CCAAACCGGC GCCGGCCACC ACGAGATCGC CTTTGCCGAC 
GACAGCCGCT ATGCCTTTGT CACGAACCAG CAGAGCGGCA CCCTCACCAT CATCGACATC 
CAGAGCCTCG CGCCGGTGAA GACCTTGCGG CTGGGCGACG GCCCTGTCAG CGTTGCCTAC 
TCCGCCCTGA GCAAGTGCGC GCACGTGGTG TGCGAGGGAG ACGGCAACCT CCTGGTCGTG 
GATGGGCTGA GCCACGAGAT TATTAGCCGG AAGACCTTCG AGCCCGGTTT CCGCGAGGTG 
CGGTTTGCGC CGGGAGACCG CTGGTACTTC ACCGTGAACG GCAAAAACGG CCAGATCCTG 
GTCTTCGACG CGGCCGGCAA CGAACTGCTC CATTCGACCG TGGTGGCGGG GCGGCCGGAG 
CATGTCAGTT TCAGTACGGA GTTTGCCTAT ATCCGGTCCC TCGGCACGGC CGACGTGACG 
CTGATCCCCC TTGCCGCCCT CGGCAAGGCC GCCATTCTGA CCCCCCTCGT CGTGTCCGGC 
GGCTCCAGGC CCCCCGCCGA TTCGCCCCTT CTTCCCCCCA CGGCGGACCC CATCGTGGTG 
ACGCCTGAGG GAAATTCCGT CCTTATCGCG AGCCCGAGCG ACGGCGCGGT GGTCTATTAC 
ATGGAGGGGA TGGGGGTTCC CATGGGGAGC TTCAAGACCT ATGGTCGGCT CCCCCGGGCC 
GTCAACGTCA TCAACCGGCA GTTGCGCCAG AACGTTCCCG GCGTGTTCAG TTCCCGGGTC 
AAGATTCCCC TGGCGGGGAC CTACGACGTG GCCGTGCTGC TCGATTCGCC CCGGATCGTC 
CAGTGCTTCG AGTTCTCGGC CGACGCTAAT CCGGCGCTGC AGCGCCTGAA AACGGAGCGG 
CCGGTTATGG TGGAATTCGT CGGCTCAGCC CTGCGGGTGG AGGCCGGTCG TGAGTCCGTG 
GTCAGGTTCA GGGTGACCGA TCCGGTGACG CACGAGCCCG TGGCCGACCT GCGCGATCTG 
ATCGTGGTGA CCTCCCTGGT GCCGACCGGG GCCTGGCGTC AGCAACTGGT GTCCCGCCCC 
GTCGGCAACG GCATCTACGA GGTCACGTTC ACGGCACGCA AAGTGGGAAT CTATTCATTC 
AATTTCGCGA TTCCTTCCCT GAAGGTGAAG CTCTATCAGC TTGCCGGCAT GATGATCCAT 
GCCGTGGAAA CACCGGCTGA GGCGGGTTCC GACGTTCCTG CCGGCCAGAA AAAGGATTAG 

 

Protein sequence

MSALIDTWFL GCRAAATAVL YVLFAVVAGG AVSAARAATV AASAPAPVTV GSGKKAVRQG 
ISLELLVKPT HAEDGFSAAV VEGAYADVSL KMTDAATGHP VTVMQPRVWI DLRKGTGDFR 
EKQMACSDKV RTYLQGTLSF RPDIDLNSYF VLTLNNDASI SVIDPIIGVA GYSQLYAMIL 
LKRPGEDWVF SFDGKRLYVT MPKAGEVAEI DTDSLAVVRN IPAGAMPVRM AFQPDSRYLW 
VGNDSSDPAR SGVTVIDPFS GTQAAFIQTG AGHHEIAFAD DSRYAFVTNQ QSGTLTIIDI 
QSLAPVKTLR LGDGPVSVAY SALSKCAHVV CEGDGNLLVV DGLSHEIISR KTFEPGFREV 
RFAPGDRWYF TVNGKNGQIL VFDAAGNELL HSTVVAGRPE HVSFSTEFAY IRSLGTADVT 
LIPLAALGKA AILTPLVVSG GSRPPADSPL LPPTADPIVV TPEGNSVLIA SPSDGAVVYY 
MEGMGVPMGS FKTYGRLPRA VNVINRQLRQ NVPGVFSSRV KIPLAGTYDV AVLLDSPRIV 
QCFEFSADAN PALQRLKTER PVMVEFVGSA LRVEAGRESV VRFRVTDPVT HEPVADLRDL 
IVVTSLVPTG AWRQQLVSRP VGNGIYEVTF TARKVGIYSF NFAIPSLKVK LYQLAGMMIH 
AVETPAEAGS DVPAGQKKD