Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1249 |
Symbol | |
ID | 2688158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1350455 |
End bp | 1352029 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637125923 |
Product | sensory box histidine kinase |
Protein accession | NP_952302 |
Protein GI | 39996351 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0948878 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAATC CCGAGCGGGC CGCACGGCGC GCGGCGCGAA AAATACGTTT CTACGAGTCA CCGGTCAGGA TCACCATCGC CCTGGGCGGC ATTATCTTCG TGGCCGAAGC CGTTGTTATG GTCGTGATGG TGCATGTCCT GCGTTTCCCG GGCAGGGCAC CCGTTGTCGA CCTGTTTACC GATTCGCTGA TGCTGCTTCT GCTCATCGCC CCGTTTCTCC ACCGATTCAT CTTCAAACCG ATGGCCGCCC AGATCGCCCA GCGAGAAGAG GCCGAGACCC GCCTAAGGAG GTATCAGTCC AACCTGGAAT CGCTGGTGGA GGACCGGACT GCCCGACTGA CCGAGGCAAT CGAGGAGCTG GAGCGTGAAA TCGTCGAGCG GAAACGGACC GAAGAGGCGC TTCTCAGGAG CGAGGAGCGT TTCCGTCAAC TGTTCGAACA GACCGAGGAT GCCATTATCC TCTTTCGCCC CGGCGGGTGT CGCATCATCG ACGTGAATCC GGTTGCGGAG AGACTCTACG GCTTTTCCAA AAAGGAGTTC TTCGAGCTTG GGCTCGAGTC GTTGATGGGC CCCAGTGATC TCGATACGTT CTGCCGGGCC ATCGGCCAGG TCAGGATGGG AGACTCGATC CGGATCGACA CCATGACCCA CACCCGCAAG GACGGCTCGG AAGTCATCGT TTCGGTGCGG GGCAAAATGG TTACGATCCA GCAGGTTGAC ATGGTTTACT GCACTATCCG CGACATTTCG AAGCGGATTC GCCTCGAGAA GGAAAGCCGG CTGATCCAGG CAAGGCTCAT TCATACCAAC AAGATGACCT CCCTGGGGGT GCTCGTGGCC AGCATCGCCC ACGAGATCAA CAACCCGAAC AACTACATCA TGGTCAACTC GGAGATACTG CGCCGTTCCT GGAACGACAT CTATCCGATC CTGCGCGACT ATTACGACGA ACATGGTGAC TTTACCATTG GCGGCATCCC TTTTTCGGAG ATGCGGGAGG CCTTCCCCGA ACTGATTGCA GGGGTCCACG ACGGTGCGCG CAGGATTCGC GATATCGTCA ACAATCTCAA GGATTTTGCG CGCAACGAGG CTTGCTCAAT CGCGGGAAAC GTGGACGTGA ACCGGGCCAT AACCATGGCG GCGACCATGC TGAACCACCA GATCCGCAAG CATACGCGGC ATTTCCGGCT GGAACTCGCC GAAGATCTCC CGCTTGTCCG GGGGAGCCTC CAGCAGCTCG AACAGGTCAT CATCAACCTG ATCATGAATG CAATCCAGGC GTTGCCCACC GAGGAGCGGG GCGTAACGGT TTCGACCACC CGCGACGGGA ACGACGGGGG GGTAGTGATC AGGGTTGCGG ACCAGGGCAG CGGCATTCCG ATCGAGATCT CCGACAGCAT TCTGGAGCCG TTTTTTACGA CGCGCCTCGA CAGCGGCGGC ACGGGGCTGG GGCTCGCCAT CTGCCATTCG ATCGTCCGGG ATCATGGGGG GGACCTGGAG TTCACGTCAG TGCCGGGCGA AGGAACTATC TTTACCGTAC ACCTGCCTGC CGCGAGCAAT CAGGGGGTGG CATGA
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Protein sequence | MTNPERAARR AARKIRFYES PVRITIALGG IIFVAEAVVM VVMVHVLRFP GRAPVVDLFT DSLMLLLLIA PFLHRFIFKP MAAQIAQREE AETRLRRYQS NLESLVEDRT ARLTEAIEEL EREIVERKRT EEALLRSEER FRQLFEQTED AIILFRPGGC RIIDVNPVAE RLYGFSKKEF FELGLESLMG PSDLDTFCRA IGQVRMGDSI RIDTMTHTRK DGSEVIVSVR GKMVTIQQVD MVYCTIRDIS KRIRLEKESR LIQARLIHTN KMTSLGVLVA SIAHEINNPN NYIMVNSEIL RRSWNDIYPI LRDYYDEHGD FTIGGIPFSE MREAFPELIA GVHDGARRIR DIVNNLKDFA RNEACSIAGN VDVNRAITMA ATMLNHQIRK HTRHFRLELA EDLPLVRGSL QQLEQVIINL IMNAIQALPT EERGVTVSTT RDGNDGGVVI RVADQGSGIP IEISDSILEP FFTTRLDSGG TGLGLAICHS IVRDHGGDLE FTSVPGEGTI FTVHLPAASN QGVA
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