| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1234 |
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| Symbol | sppA-2 |
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| ID | 2686661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 1336399 |
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| End bp | 1337181 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637125908 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | NP_952287 |
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| Protein GI | 39996336 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGGCCG CAACCATCGG CGACGGGATT GGCTATGCGG AGGTGAAGGG GCCCATCATC
GATTCCCAGG AAACCGTCAA ACAGCTCGAC GACCTTCGCA AGAAGAGCAG CGTCAAGGCA
GTAGTGCTGA GGGTCGAGTC GCCGGGCGGG GTCATTGGCC CGTCCCAGGA GATATACGCC
GCGGTCAAGC GGTTGGCCGC CACCAAGAAG GTTGTTGTTT CCATGGGGAG CGTGGCGGCC
TCGGGCGGCT ACCACGTCGC CGTGCCCGCT GCCGTGATCT ATGCCAATCC GGGGACCATC
ACCGGCAGCA TTGGCGTACT CATGAAGCTC TCGAATATCG AAGGGCTCAT GGACAAGGTG
GGCCTCAAGG CATTTACCCT CAAGAGCGGC AAGTTCAAGG ATTCCGGCTC TCCCGTGCGG
AAGCTCACCG AGGAGGAGCG GGCCGTTCTT CAGGGGGTCA TCGACAACCT TCACGATCAG
TTCGTACGTG CTGTGGCGGA GGGAAGACAG CTGCCGGTCG AGGAGGTGCG CCGGCTTGCC
GACGGCAGGG TCTACACCGG TGAGCAGGCC CTTCGTCTCA AGCTCGTGGA CCGGCTCGGC
ACGCTGCACG ATGCCGTAAT GGAGGCAGGG CGTCTGGCTG GAATCGAGGG AGAGCCGACC
CTGATCATCC CCCCGAAAAA ACGCAAGCTG CTGCGGGACA TGCTCTTCGG CGAAGTGGCC
GAGGCGGTAC GCGGGTCGGT GCGCAAGGAG GAGGGACTCA GCTTCAGCTA CGAACTGGAG
TGA
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| Protein sequence | MTAATIGDGI GYAEVKGPII DSQETVKQLD DLRKKSSVKA VVLRVESPGG VIGPSQEIYA
AVKRLAATKK VVVSMGSVAA SGGYHVAVPA AVIYANPGTI TGSIGVLMKL SNIEGLMDKV
GLKAFTLKSG KFKDSGSPVR KLTEEERAVL QGVIDNLHDQ FVRAVAEGRQ LPVEEVRRLA
DGRVYTGEQA LRLKLVDRLG TLHDAVMEAG RLAGIEGEPT LIIPPKKRKL LRDMLFGEVA
EAVRGSVRKE EGLSFSYELE
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