Gene GSU1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1228 
Symbol 
ID2688220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp1330696 
End bp1331709 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content61% 
IMG OID637125902 
Productcytochrome c family protein 
Protein accessionNP_952281 
Protein GI39996330 
COG category 
COG ID 
TIGRFAM ID[TIGR01905] doubled CXXCH domain
[TIGR03508] decaheme c-type cytochrome, DmsE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0933631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGGAT ACGGAAAAGC GTTTGTTGCA CTGAGTGTCT CACTGGTCGT CGGCGTCTCG 
CTTCTCGCGG GCTGCGCGGC GCTCAAGCAG GACCGTCCGC TCCTGCCGGT CAGGGAGTAT
GAACGGATGA TCGTTGGGCG TCTCGATGCG GAGTACGTGG GGACCGACAA CTGTGTGGCC
CGTTGCCACA AGCATGAAAA GATAACCGAC GATTTCCGCC ATAGCGTCCA CGGCGAGCAG
ATCCGCCCCG AAACAGGCCT CCCCCTGGTT AACTGCGAAT CATGCCACGG GCCGGGAAGC
CTGGCCATCG AGAAGGTCGG GGAAGATGTG GCGTACAACG ACGAACACAA AGTCAAGTGC
GACACCGGCA AGCTCCTCGA CATCAAAAAT CTGCATACCC CCGCTCAATC GCTCATCTGC
CTCAAATGTC ATACCGCCGC ATCAACGCCG AGTCTTGCCC ACTGGAACAC CGGTGTTCAT
GCCTTGAACG ACGTCGGCTG CTTCGACTGC CACAAGCTTC ACCAGGGCTC CCAGCAGAAG
GTGAGCCGGG AGGAGATGGC GGAGATGTGC TACAGCTGCC ATCCCCAGGT GAAGGCCGAA
GCCCAGCTCT TTTCACACCA TCCGCTCCGG GAGAGGAAAA TGGCGTGCAC CGACTGTCAT
GAGCCCCATG GTTCCACCCA GGAGCACCTT CTGCGGGGCA ACACGGTCAA GGAGATGTGT
ACCCGCTGCC ACATGGACAA ACAGGGCCCC TTTGCCTTCG AGCATGGCGA CGTGACCGAG
AACTGCTCCA CCTGCCACAC TCCCCACGGC TCGGTCAGCA ACCACCTCCT GAACGCGGCG
ATGCCGTTCC TGTGCCTCCA GTGCCATTCG GGCCATTTCT ACACCCTCGA CGCGGACCCG
GCGACTGCGT CCCAGAACAG GCGGCTTTTC GCCAACCGCT GTACCGACTG CCATTCACAG
ATTCACGGAA CCGATATGCC TTCCGCCGAA GGGCGTGCCT GGTTCCTGCA GTGA
 
Protein sequence
MRGYGKAFVA LSVSLVVGVS LLAGCAALKQ DRPLLPVREY ERMIVGRLDA EYVGTDNCVA 
RCHKHEKITD DFRHSVHGEQ IRPETGLPLV NCESCHGPGS LAIEKVGEDV AYNDEHKVKC
DTGKLLDIKN LHTPAQSLIC LKCHTAASTP SLAHWNTGVH ALNDVGCFDC HKLHQGSQQK
VSREEMAEMC YSCHPQVKAE AQLFSHHPLR ERKMACTDCH EPHGSTQEHL LRGNTVKEMC
TRCHMDKQGP FAFEHGDVTE NCSTCHTPHG SVSNHLLNAA MPFLCLQCHS GHFYTLDADP
ATASQNRRLF ANRCTDCHSQ IHGTDMPSAE GRAWFLQ