Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1228 |
Symbol | |
ID | 2688220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1330696 |
End bp | 1331709 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637125902 |
Product | cytochrome c family protein |
Protein accession | NP_952281 |
Protein GI | 39996330 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01905] doubled CXXCH domain [TIGR03508] decaheme c-type cytochrome, DmsE family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0933631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGGAT ACGGAAAAGC GTTTGTTGCA CTGAGTGTCT CACTGGTCGT CGGCGTCTCG CTTCTCGCGG GCTGCGCGGC GCTCAAGCAG GACCGTCCGC TCCTGCCGGT CAGGGAGTAT GAACGGATGA TCGTTGGGCG TCTCGATGCG GAGTACGTGG GGACCGACAA CTGTGTGGCC CGTTGCCACA AGCATGAAAA GATAACCGAC GATTTCCGCC ATAGCGTCCA CGGCGAGCAG ATCCGCCCCG AAACAGGCCT CCCCCTGGTT AACTGCGAAT CATGCCACGG GCCGGGAAGC CTGGCCATCG AGAAGGTCGG GGAAGATGTG GCGTACAACG ACGAACACAA AGTCAAGTGC GACACCGGCA AGCTCCTCGA CATCAAAAAT CTGCATACCC CCGCTCAATC GCTCATCTGC CTCAAATGTC ATACCGCCGC ATCAACGCCG AGTCTTGCCC ACTGGAACAC CGGTGTTCAT GCCTTGAACG ACGTCGGCTG CTTCGACTGC CACAAGCTTC ACCAGGGCTC CCAGCAGAAG GTGAGCCGGG AGGAGATGGC GGAGATGTGC TACAGCTGCC ATCCCCAGGT GAAGGCCGAA GCCCAGCTCT TTTCACACCA TCCGCTCCGG GAGAGGAAAA TGGCGTGCAC CGACTGTCAT GAGCCCCATG GTTCCACCCA GGAGCACCTT CTGCGGGGCA ACACGGTCAA GGAGATGTGT ACCCGCTGCC ACATGGACAA ACAGGGCCCC TTTGCCTTCG AGCATGGCGA CGTGACCGAG AACTGCTCCA CCTGCCACAC TCCCCACGGC TCGGTCAGCA ACCACCTCCT GAACGCGGCG ATGCCGTTCC TGTGCCTCCA GTGCCATTCG GGCCATTTCT ACACCCTCGA CGCGGACCCG GCGACTGCGT CCCAGAACAG GCGGCTTTTC GCCAACCGCT GTACCGACTG CCATTCACAG ATTCACGGAA CCGATATGCC TTCCGCCGAA GGGCGTGCCT GGTTCCTGCA GTGA
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Protein sequence | MRGYGKAFVA LSVSLVVGVS LLAGCAALKQ DRPLLPVREY ERMIVGRLDA EYVGTDNCVA RCHKHEKITD DFRHSVHGEQ IRPETGLPLV NCESCHGPGS LAIEKVGEDV AYNDEHKVKC DTGKLLDIKN LHTPAQSLIC LKCHTAASTP SLAHWNTGVH ALNDVGCFDC HKLHQGSQQK VSREEMAEMC YSCHPQVKAE AQLFSHHPLR ERKMACTDCH EPHGSTQEHL LRGNTVKEMC TRCHMDKQGP FAFEHGDVTE NCSTCHTPHG SVSNHLLNAA MPFLCLQCHS GHFYTLDADP ATASQNRRLF ANRCTDCHSQ IHGTDMPSAE GRAWFLQ
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