| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1216 |
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| Symbol | cydC |
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| ID | 2686716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 1319807 |
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| End bp | 1321453 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637125890 |
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| Product | transport ATP-binding protein CydC |
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| Protein accession | NP_952269 |
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| Protein GI | 39996318 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.257864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGAGC TCTTCCGTAT CCTCGCCGTG GCCCGCGGAC AGTGGTCATG GATGGCGGCC
GGCATGCTCC TCGCCGTGGC CGTTATCGCT GCCAACGCCC TTCTCATGGC AGTTTCCGGC
TGGTTCATCG CCTCCATGGC CGTTGCCGGC ACCACGGGCG CCGCCTTCAA CTACTTTTTC
CCCTCGGCCG CCATCCGCGG GCTCGCCATC CTGCGGACCG TGGGGCGCTA CCTGGAGCGC
CTGGTGACCC ACGAGGCCGG CTTCCGGGTC CTTGCCCTCC TGCGCGTCTG GCTCTTCCGG
CGGCTTGAGC CCCTGGCGCC GGCAACGCTG GAGCGGTTGG GCGGGGGAGA CGTGGCCGGG
AGGCTCCGGT CGGACGTGGA TGCCCTGGAA AGTCTCTATC TGCGGATCAT GCTCCCTCTC
GCCGCCGGTG GGGGGGCTAT CCTGGCTGCA ACGGCTTTTG TTGCCCTCTG GAGCACCTCT
GCCGCCGGAG TTCTTTTTCT CGCACTGCTG GCCGCCGGGG TGGGCCTGCC CCTGGTGGCG
CGCCGATTGG CGGAGCAGCC CGGCCGCCGT TCCGCCGAAC TGGCCGGCAG CCTGCGGGAA
GCCGTGACCG AAGGGCTTCA GGGCGGCGAG GAGCTGATCC TGCTGGGGGC GGTCGAGCGT
CAGGCGTCGC TGGTTGATGA TCTTTCGCGA CGGCTGGTGG CGGAGCAGGA GCGTCTGGCG
GCAGGAGGAG GCGTCACCCT GGCGGGTGGG ATTGTCTGCG GCGGGGTCGG GGTGGCCGCA
GTCCTTGCGA TTGCATCCTT TCAGGTTGCC GCCGGGGAAC TCGGCGGACC GCTGCTGGTG
ATGCTGCTAC TCTTTGCCGC GGCTGCCTTC GAGGCTGCCG GCGGAATGCC CGCTGCGCTC
CAGCACCTGC CAGCCGCCCG GGAGTCGGCG CGAAGAATTC TCGAACTGGC CGATTCACCG
CCGCCGGTGC CGGAACCCGC TACGCCGGTG CCTCTCCCGG CCACCACGGA GATCGTCTTC
CGCAACGTCT CGTTCTCCCA TGACCCCTCT CTGCCGGTAC TCCGGGACGT TAACCTGACC
GTGCCCGCCG GGGGACGGGT AGCGCTCATG GGCCCCAGCG GCTCGGGCAA GAGTACCGTG
GCCGACATCC TCCTTCGCTT CCGCGATTAC GGGGGAAGCG TCACCCTGGG GGGCATCGAA
CTCCGTGACC TGGGAGGGGA GGCTATTCGC GGGCTGATCG CTGTGGTTCC CCAACAGCCC
CACCTCTTCA ACGGCACCAT CAGAGAGAAT ATCCTTCTGG GCAACCCGGC GGCCGAAGAG
GAGCAGGTGC GTCGGGCTGT CCGGGATGCT GCCCTTGCCG AGTGGGTCGA CGGATTGCCC
CTGGGTCTGG ATACCCCGGT GGGTGAGGGG GGGAGTGCCG TGTCGGGAGG AGAGGCCCGC
CGGATCGCCC TGGCCCGGGC CCTGTTGAAG GATGCACCGG TTTTTCTGCT GGACGAGCCC
ACCGAGGGGC TCGACTTCGC CACCGAACAA CGGGTGATTG CAGCGCTGGC GAATCGGACC
GAGGGGAAGA CCGTGCTGAT CATTTCCCAC CGTCCAGCTT GTGGTGACAT GGCTGAACAG
GTGCACTATT TTGTTAAAGT TCCCTGA
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| Protein sequence | MRELFRILAV ARGQWSWMAA GMLLAVAVIA ANALLMAVSG WFIASMAVAG TTGAAFNYFF
PSAAIRGLAI LRTVGRYLER LVTHEAGFRV LALLRVWLFR RLEPLAPATL ERLGGGDVAG
RLRSDVDALE SLYLRIMLPL AAGGGAILAA TAFVALWSTS AAGVLFLALL AAGVGLPLVA
RRLAEQPGRR SAELAGSLRE AVTEGLQGGE ELILLGAVER QASLVDDLSR RLVAEQERLA
AGGGVTLAGG IVCGGVGVAA VLAIASFQVA AGELGGPLLV MLLLFAAAAF EAAGGMPAAL
QHLPAARESA RRILELADSP PPVPEPATPV PLPATTEIVF RNVSFSHDPS LPVLRDVNLT
VPAGGRVALM GPSGSGKSTV ADILLRFRDY GGSVTLGGIE LRDLGGEAIR GLIAVVPQQP
HLFNGTIREN ILLGNPAAEE EQVRRAVRDA ALAEWVDGLP LGLDTPVGEG GSAVSGGEAR
RIALARALLK DAPVFLLDEP TEGLDFATEQ RVIAALANRT EGKTVLIISH RPACGDMAEQ
VHYFVKVP
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