Gene GSU1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1215 
SymbolcydD 
ID2686721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp1318089 
End bp1319810 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content70% 
IMG OID637125889 
Producttransport ATP-binding protein CydD 
Protein accessionNP_952268 
Protein GI39996317 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components 
TIGRFAM ID[TIGR02857] thiol reductant ABC exporter, CydD subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00367068 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACG GCACGCCTGA GCATACCGGG CAACGGCCCG AGCAGTGGCT CATGGGCGAG 
GCCCGGCAGG TGCGGGGACC TCTCCTGGTT GCGATAGGTT GTGCCTTTGC GGCCGGGCTG
CTGGTCATCC TCCAGGCCCG GCTCCTGGCG TCGGCCTGCC ATCGGGTGGT TATCGGTGGA
GCCGGAGGAG AGTCGGTGCT CCCTCTCGCG ACTGCCGTTG CCGCCGTGGC CCTCGGACGG
GGCGTGCTGG CCCTTGTGTC CGAACGGCGC TCCGCCGCGG CTGCGGCGCG CCTCAAGGAA
CGGGTGCGCA GCGCTCTCTA CCGGCGGCTC CTGGCCCTGG GACCGGCCGG CAGGGCAGGG
GAGGAGACCG GCCCTCTGGT GGAAGCGGTG ACGGCGGGCG TGGAAGGGCT CGAACCCTAC
GTGGCCCGCT TTCTGCCCCA TCTGGCCCTG GCGGCGCTCC TGCCGGCGGC GGTCCTGTTC
GTCGTGGTCC CGGCCGAGTG GCGCGCCGGC CTCGTCCTTC TTTTTTCCGC CCCGTTCATT
CCCCTGTTCA TGGTCCTCAT CGGCCGGGGA TCCGAAAGCC TCAACCGGCG CCAGTGGGGC
CGGCTTTCCC GGCTGGCGGG ACACCTCCTC GACCTGGTGC AGGGTCTGCC GGACCTGAAG
CTGTTCGGAG CGGTCAAGCG CGAGGCCGAG GCCGTGGCGC GGGTTTCTGA GGAGTATCGC
CAGGCGACCA TGGCGGTGCT CCGGATTGCC TTCCTTTCGG CCTTTACCCT GGAGTTTTTC
GCCACCGTCG GCACAGCGGT GGTGGCCGTA GTGGTGGGCT TTCGGCTTCT GTCCGGGAGC
CTGGGGCTCG TCGATGGCCT CTTCGTGCTG CTCCTGGCGC CGGAATTCTA CCTGCCGCTC
CGGACGCTGG GGCTCTCCTA CCATGCCCGG ATGCAGGGGG TGGCCGCCGC CGAGCGGCTC
ACCCCCCTCA TGTCCCTTCC CTTGCCCCAT GGCGGGATGG ACGGGCTGCC CATCCCGCCG
GGAGCGCCGG CCATCCGGTT CGAAGGGGTC AGCTTCCGCT ATGGCGGCGA ACGGGGCGGG
GTCGAGGGGA TCGACCTGGA ACTGCCGGCC GGCAGCATCA CGGCGCTTGC GGGAAGGAGC
GGCGCAGGCA AGACGACGCT GGTTCGGCTT CTGGTGGGGT TGGCCCGGCC GGTGCAGGGG
AGGATTACGG TCAACGGGAT CGACCTGGGC CTCGTACAGC CGGACGCCTG GCGGTCGACC
ATTGCCTGGG TGCCCCAACG TCCCTTTTTC TTCAGGGCGA CCATTCGGGA GAACCTTCTG
CTCGGCCGGC CGGATGCCTC CGATGACGAT ATCCGTGCCG CCCTTGATGC GGCGACGGCA
ACGCCTTTCA TCCAACGGCT GCCCCAAGGG CTTGAAACCT TGCTGGGCGA TCGAGGAGCG
GGGCTGTCCG GGGGCGAGCT GCGGCGGCTG GCCCTGGCGC GGGCGTTTGT GCGCCGGGCG
ACACTCGTGG TCCTGGATGA GCCGACCGCC GGTCTCGACC CCGAAAACGA ACGCCTGGTG
GGCGATGCCC TGGACCGGAT CGCCGCGGGA AGGACGGTAC TGGTGATTTC CCACCGCGAG
GAGACCATCC GCCGGGCCGG GCGGGTGGCA GTGCTCGCGG GAGGCACCAT CGAAGGAATC
ATGGGGGCCG AAGCGTTCCT GGCACAGGAG GGCCCGGCAT GA
 
Protein sequence
MNNGTPEHTG QRPEQWLMGE ARQVRGPLLV AIGCAFAAGL LVILQARLLA SACHRVVIGG 
AGGESVLPLA TAVAAVALGR GVLALVSERR SAAAAARLKE RVRSALYRRL LALGPAGRAG
EETGPLVEAV TAGVEGLEPY VARFLPHLAL AALLPAAVLF VVVPAEWRAG LVLLFSAPFI
PLFMVLIGRG SESLNRRQWG RLSRLAGHLL DLVQGLPDLK LFGAVKREAE AVARVSEEYR
QATMAVLRIA FLSAFTLEFF ATVGTAVVAV VVGFRLLSGS LGLVDGLFVL LLAPEFYLPL
RTLGLSYHAR MQGVAAAERL TPLMSLPLPH GGMDGLPIPP GAPAIRFEGV SFRYGGERGG
VEGIDLELPA GSITALAGRS GAGKTTLVRL LVGLARPVQG RITVNGIDLG LVQPDAWRST
IAWVPQRPFF FRATIRENLL LGRPDASDDD IRAALDAATA TPFIQRLPQG LETLLGDRGA
GLSGGELRRL ALARAFVRRA TLVVLDEPTA GLDPENERLV GDALDRIAAG RTVLVISHRE
ETIRRAGRVA VLAGGTIEGI MGAEAFLAQE GPA