Gene GSU1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1200 
SymbolrpsA 
ID2685786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp1303580 
End bp1304788 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content63% 
IMG OID637125874 
Product30S ribosomal protein S1 
Protein accessionNP_952253 
Protein GI39996302 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID[TIGR00717] ribosomal protein S1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000802868 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGACA ACGAAAACAA CGTAAACGAG CCGGCCGAGG AGGAGAGCTT CGCCGAGCTC 
TTCGAAAAGA GCAATCGCAG GACCGAGCGG CTGCGGCCAG GCTCAAAGGT GGACGCACGG
GTGCTCAAGA TCGGCGCCGA GTGGGTCTTC CTCGATATCG GCAGCAAGGG TGAAGGGGTC
ATGGAGCGCA AGGAGCTCCT GGACAAGGAC GGCAATCTGA CGGTCGCCGA AGGGGACACC
ATCCCGGTCT GGTTCGTGAA GGTTGAGCGG AACGAGATGC GCTTCACCAC CAAGGTCGGC
ACGGGGCAGG CGGGCCTGTC CGCCCTGGAG GACGCCTATC GTGCCGGCAT CCCCGTGGAG
GGGAACGTCG AGAAGGAGAT CAAGGGGGGC TTCGAGATCA AGGTCGGCGG TACCGTCCGC
GCTTTCTGCC CCTATTCGCA GATTTCGCTC CGCCGGGCGG CCAATCCGGC CGAATTCGTG
GGACGCCAGC TCCTGTTCAA GGTGGTGGAA TTCGCCGAGC GCGGACGCAA CATCGTCCTT
TCCCACCGCG CGATCCTTGA GGAGGAAGAG CGGCAGAAGC GCGAGGCGTT GAAGGATACT
CTCAAGGAGG GCACGACCCT AACCGGCACC GTGACCCGTC TCATGCCTTT CGGCGCGTTC
GTCGACATCG GCGGTGTTGA GGGGCTCATT CCCATTTCCG AGGCCGGTTG GAGCCGGGTG
AAGGAGATCG GCGACGTCCT GTCCGTGGGT GAGCAGGTGA CCGCCCTGGT GAAGCGGATC
GACTGGGAGA ACAACAAGAT ATCTCTCAGC CTCCGCGATG TTCAGGCCGA CCCCTGGGAG
GGGATTGCCG AGCGCTTCCC GGAAGGGTCC TACCACACGG GAACCGTGGC GCGGCTCGCT
CCGTTCGGCG CTTTTGTAAC TCTTGCCCCG GGCATCGACG GACTCATCCA CATCTCCAAG
CTCGGTGCCG GCAAGCGGAT AGCCCATCCC CGGGAGGTGC TCAAGGAGGG TGACGCCGTT
GAGGTAACGG TCGAGGGTGT AGACCGCGAG AGCCGCCGTC TTTCCCTTGC GCTGGCCGCC
ACCAAGCGAG CGGCAGAGGA AGAGGAGCGG AGCATTGCCG AATTCCGCGG TAAGGGCGCG
GCGCAGACCA AGGATTCCAT GGGAACGTTC GGCGACATTC TCAAGGCCCA GCTCGACGAC
AAGAAGTAG
 
Protein sequence
MIDNENNVNE PAEEESFAEL FEKSNRRTER LRPGSKVDAR VLKIGAEWVF LDIGSKGEGV 
MERKELLDKD GNLTVAEGDT IPVWFVKVER NEMRFTTKVG TGQAGLSALE DAYRAGIPVE
GNVEKEIKGG FEIKVGGTVR AFCPYSQISL RRAANPAEFV GRQLLFKVVE FAERGRNIVL
SHRAILEEEE RQKREALKDT LKEGTTLTGT VTRLMPFGAF VDIGGVEGLI PISEAGWSRV
KEIGDVLSVG EQVTALVKRI DWENNKISLS LRDVQADPWE GIAERFPEGS YHTGTVARLA
PFGAFVTLAP GIDGLIHISK LGAGKRIAHP REVLKEGDAV EVTVEGVDRE SRRLSLALAA
TKRAAEEEER SIAEFRGKGA AQTKDSMGTF GDILKAQLDD KK