Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1195 |
Symbol | |
ID | 2686743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1299515 |
End bp | 1300162 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637125869 |
Product | HD domain-containing protein |
Protein accession | NP_952248 |
Protein GI | 39996297 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.184086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATATCC TGACGCTTGA CCTGGGGCTC GATCCGGGTG AACGGCGCCT GGCCGGGGTG GTTGCCCTGC TGCACGATGT GGGGCGGTTC GAACAGTACC GTTGCTATGG CACCTTCAGG GACAGCGAGT CGGAAAACCA TGGGACCCTC GGCGTCCGCG TGCTGACGGG GGAGGGAGTG CTCGACGGCC TGGCGCCGGA GGAGCGGCGG ATGATCCTCG GCGGCGTGGC GCTCCACAAC GTGTTCCGGA TTCCCGATGC CATTGACGGC CCGGCCCGCC GGCTGCTGCA CCTGGTGCGC GACGCGGATA AACTGGATAT CTGGCGGGTG TTCCTCGAAT TCTACGGTCT GCCCCCGGAG GAACAGGCTT CGGCAGTGGG GCTGGGGTTT CCGGATCTGC CGGTCTGTAC CCCCGGGGTG GTGGAAACGG TCATGCGGGG AGAACTGGTC AACCTGGCGA CCCTGAAGAC CCTGAGCGAC TTCAAGCTCC TTCAACTTTC ATGGGTATTC GACCTGAATT TCGCTGTGTC GCGGCGGCTG GTGGTGGAGC GAAACTACGT GGAACAGATG GCGGCGACCC TGCCTCCGGG AGAGGACGCA GCCCGGGTCG TGGCGTTCGT GCGGGAGTAT CTGGCGCGGT CGGGCTAG
|
Protein sequence | MDILTLDLGL DPGERRLAGV VALLHDVGRF EQYRCYGTFR DSESENHGTL GVRVLTGEGV LDGLAPEERR MILGGVALHN VFRIPDAIDG PARRLLHLVR DADKLDIWRV FLEFYGLPPE EQASAVGLGF PDLPVCTPGV VETVMRGELV NLATLKTLSD FKLLQLSWVF DLNFAVSRRL VVERNYVEQM AATLPPGEDA ARVVAFVREY LARSG
|
| |