Gene GSU1180 details

Gene Information

• Locus tag: GSU1180
• Symbol: ftsH-1
• ID: 2686793
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 1286588
• End bp: 1288441
• Gene Length: 1854 bp
• Protein Length: 617 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637125854
• Product: cell division protein FtsH
• Protein accession: NP_952233
• Protein GI: 39996282
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.334987
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGGCAAT CGGTCTGGAA ACCGATACTC TGGATGCTTG GTCTGCTGGT GATATTCAAT 
CTGATTTACA CCTATGTTGC CCGCCAATCC GTCGATGGTG GCGCGGTCGT ATCCTACAGC 
CGGTTCCGGG CCGAACTGGC GGCCGGTAAC ATCAAGCGTA TAACGATCAA GGGCACCACC 
ATCGCCGGCG ATTTTCGCAA TAAGATAACC GTTGACCAGC CTGCGGGCGA CAAGACCGTG 
GCCCGCGAGA CGGCCAAGTT TTCTACGGTA AAGCCAGCCA TCGACGATCC TTCTCTCATG 
GCGGACCTCC AGGCAAAAAA TGTCGAGGTG ACCGCAGTGA CGACGGAGAC GTCGCCGATT 
GTCAGCGGGC TTCTCTATGT ACTGCCGTGG ATTTTGATCA TCGGCGTCTG GTGGCTGGCC 
ATGCGGGGAA TGCGGGGGCA GGGACCCACG TCGGTCATGG GAAATTTCTC CAAGTCAGGT 
GCCAAGATGT ACACTCCCAG CGCCAAGGTC AAGGTAACCT TCGACGACGT GGCCGGCATG 
GAGAACCCGA AGATGGAACT GAAAGAGATC GTCGATTATT TGCGTGATCC TAAAAAGTTC 
CAGCGAATCG GCGGCAAAGT GCCCAAGGGA GTGCTCCTGG TCGGGCCACC GGGCACGGGA 
AAGACCCTCC TGGCCCGGGC AGTGGCGGGT GAGGCGGACG TTACCTTTCT GAGCATCTCA 
GCGTCCCAGT TTATCGAGAT GTTCGTCGGC GTCGGCGCCG GACGGGTGCG TGATCTCTTT 
GCCACGGCCA AGAAGTCGGC TCCGAGCATC ATCTTCATCG ACGAGCTGGA TGCGGTGGGG 
CGCAGCCGTG GCGCCGGGCT CGGCGGGGGG CACGACGAGC GGGAGCAGAC CCTGAATCAG 
CTTCTCTCCG AAATGGATGG ATTCGACTCC CATGACGAGG TGATCGTCAT GGCAGCCACT 
AACCGGCCCG ACGTCCTTGA TCCGGCGCTC CTTCGCCCCG GGAGGTTCGA CCGGCACGTG 
GTCATCGACC GTCCCGACTG GCGGGATCGG GAGAAAATAC TTCATGTTCA CACCCGCAAG 
ATTCCCCTCG ACAAGGATGT GGATCTGGCC GTCATTGCCC GGGGAACGCC CGGCATGGCC 
GGTGCCGATC TGGAAAACCT CGTCAACGAG GCGGCCATCC TGGCGGCTCG GGAGAACGCC 
GCGACCGTTA CCATGGAGCA TATGGAGCGG GCCAAGGACA AGGTTCTCAT GGGGGGAGAG 
CGGAAGATGT TCATCACGGA GCAGGAGAAG CGGATTACCG CCTATCACGA GGCAGGCCAT 
ACGATCGTGG CCAAGCTCCT GCCCGGAACC GACCCGGTCC ACAAGGTGAC CATCATTCCG 
CGGGGGCAGG CTCTTGGGGT AACTCAGCAA CTACCCGAAG ATGATCGCTA CCACTACCCG 
AAGTCGTATC TCATGAACCG GCTGTCCGTG GCACTTGGCG GCCGGCAGGC GGAGCGGGCC 
GTGTTCGGCG ATCTCTCCAC CGGGGCCCAG AATGATCTCA AAATGGTCAA CGATCTGGCG 
GAGAAGATGG TCTGCCAGTG GGGCATGAGC GACAAGATCG GCGCCATGAC CTTCAGCCGT 
GGAGAGGAGC ATCCTTTTCT CGGACGAAAG CTGGCCGAGG AAAAAACCTT CTCCGAGCAG 
ATGGCGTGGC TCATCGATCA GGAAATCGCC GCCATCATTA AAGAAGCGGA GCAGAAGGCC 
GATAACGTCA TTGCCAACAA CCGCGGCAAG CTCGATGCGC TGGTGGATGC TCTCATGGAA 
GAGGAGACCC TGGACGGCAA ACGCATCGAC GAGGTCCTGG CCTCTGTGCC GTGA 

 

Protein sequence

MGQSVWKPIL WMLGLLVIFN LIYTYVARQS VDGGAVVSYS RFRAELAAGN IKRITIKGTT 
IAGDFRNKIT VDQPAGDKTV ARETAKFSTV KPAIDDPSLM ADLQAKNVEV TAVTTETSPI 
VSGLLYVLPW ILIIGVWWLA MRGMRGQGPT SVMGNFSKSG AKMYTPSAKV KVTFDDVAGM 
ENPKMELKEI VDYLRDPKKF QRIGGKVPKG VLLVGPPGTG KTLLARAVAG EADVTFLSIS 
ASQFIEMFVG VGAGRVRDLF ATAKKSAPSI IFIDELDAVG RSRGAGLGGG HDEREQTLNQ 
LLSEMDGFDS HDEVIVMAAT NRPDVLDPAL LRPGRFDRHV VIDRPDWRDR EKILHVHTRK 
IPLDKDVDLA VIARGTPGMA GADLENLVNE AAILAARENA ATVTMEHMER AKDKVLMGGE 
RKMFITEQEK RITAYHEAGH TIVAKLLPGT DPVHKVTIIP RGQALGVTQQ LPEDDRYHYP 
KSYLMNRLSV ALGGRQAERA VFGDLSTGAQ NDLKMVNDLA EKMVCQWGMS DKIGAMTFSR 
GEEHPFLGRK LAEEKTFSEQ MAWLIDQEIA AIIKEAEQKA DNVIANNRGK LDALVDALME 
EETLDGKRID EVLASVP