Gene GSU1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1172 
SymbolmviN 
ID2686800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp1276965 
End bp1278530 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content62% 
IMG OID637125846 
Productvirulence factor mviN protein 
Protein accessionNP_952225 
Protein GI39996274 
COG category[R] General function prediction only 
COG ID[COG0728] Uncharacterized membrane protein, putative virulence factor 
TIGRFAM ID[TIGR01695] integral membrane protein MviN 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAA AGAAGCAGAT AGCCCGGGCT GCCGGCGTCC TCGGCCTGGC AACCATCGTC 
TCCCGCATCA TGGGGATGGT GCGCGACATG GCCGTCTCCC GTTTTTTTGG CGCCGGCCTC
CAGACCGACG CCTTCTTCGC TGCCTTCCAG ATTCCCAATA TGCTGCGCCG GTTTTTCGCC
GAGGGTGCCC TTACGTCGGC ATTCGTGCCG ACCTTCTCCG AGTGGCACTC CCAGCGAAGC
CCCGAGGAGG CGCGCGAGCT CGCCAACGTG TGCTTCACGC TTCTCACCAT TGTCATGGCG
GGCGTGACCC TGGCGGGGGT CCTGCTCGCT CCCGGCATCG TCTCGGTCAT GTTTCCCGGT
TTCAGGGCCG ACCCGACCAA GTTCGGGCTC ACGGTCTTTC TCAACCGGCT CATGTTCCCG
TATATTTTCT TCATAAGCCT GCTGGCGCTC TGCATGGGGA TACTCAATAC GGTTCGCCAC
TTTTTCACCC CGGCCATCTC CACCGTGTTT CTGAACGTTT CCATGATTCT CTGTGCCTGG
CTGCTTCGAG ACCGGTTCGC GGTGCCGATC ACTGCCTTGG CCGTGGGGGT CCTTATGGGT
GGGGTCCTTC AGCTCCTCCT TCAGGTGCCG GTGCTCTACC GCAAGGGATT CCCGCTTCGC
GTCCGTTTCG ATCTCCACCA TCCCGCGGTA CGGCGCATCG CCCTTCTCAT GGGGCCGTCG
GTTTTCGGGG TTGGGGTCTA CTACCTGAAC ATCACTGTGG GCAATATTCT TGCTTCGCTC
CTTCCCGAGG GAAGCGTCTC GTACCTCTAC TACGCCCAGC GACTGTTCGA GTTCCCTCAG
GGGATCTTCA CCGTTTCCGT GGCCCAGGCG GTTCTGCCGT CACTGAGCCG GCAGGCGGCG
GCCGGCGACA TGGATGCCTT CCGGGAGTCT CTCGTCTTCG GCCTGCGGCT CACCCTGTTC
GTTACCATTC CGGCCACGGT GGGCCTTATG GTCTGCGCTA CCCCCATTTT CAGCCTCCTC
TTCATGGGGG GGGAGTTCGA CTACGCCCAA GCCGCCAATG CGGGAATAGC CCTGTTCTAC
TACGCCATTG GACTTTCGCT CGTGGCCTTG GTGCGGGTTC TGGTGCCCGC GTTTTACGCT
CTCAAGGATA CGAGGACGCC GGTCATGGTC GCCTTCGTCG CCTTCATCAT GAACGCCGTT
GCCAGCCTCA TCCTCATGAA ACCTCTCGCC CATGGCGGAT TGGCCCTGGC GTCCTCCCTG
TCCGCCCTTG CCAACATGGG GCTCCTTCTG GTCCTCCTGC GGCGGAAGAT CGGTCCGTTC
GGCGGGAGGG CTTTGGTCCG TTCAGGCATG AAGGTTCTCG CGGCATCCCT GCCCATGGCG
CTGGCGGTCC GTTGGATGGT GGCGCTCATC GATTGGTCAC TGCCAGGGGA AAAGATGCTT
AAGGGGGGAG TTCTGCTCGG CGCCGTGGGC GTGGGCATCG TGTTGTTTCT TGCAGCCGCC
GCGTTGCTCC GCAGCGAAGA GACGCGCGAG CTGGCGGCAC AACTCAGAAG GAGGTTTGCT
CGATGA
 
Protein sequence
MSEKKQIARA AGVLGLATIV SRIMGMVRDM AVSRFFGAGL QTDAFFAAFQ IPNMLRRFFA 
EGALTSAFVP TFSEWHSQRS PEEARELANV CFTLLTIVMA GVTLAGVLLA PGIVSVMFPG
FRADPTKFGL TVFLNRLMFP YIFFISLLAL CMGILNTVRH FFTPAISTVF LNVSMILCAW
LLRDRFAVPI TALAVGVLMG GVLQLLLQVP VLYRKGFPLR VRFDLHHPAV RRIALLMGPS
VFGVGVYYLN ITVGNILASL LPEGSVSYLY YAQRLFEFPQ GIFTVSVAQA VLPSLSRQAA
AGDMDAFRES LVFGLRLTLF VTIPATVGLM VCATPIFSLL FMGGEFDYAQ AANAGIALFY
YAIGLSLVAL VRVLVPAFYA LKDTRTPVMV AFVAFIMNAV ASLILMKPLA HGGLALASSL
SALANMGLLL VLLRRKIGPF GGRALVRSGM KVLAASLPMA LAVRWMVALI DWSLPGEKML
KGGVLLGAVG VGIVLFLAAA ALLRSEETRE LAAQLRRRFA R