Gene GSU1162 details

Gene Information

• Locus tag: GSU1162
• ID: 2688420
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 1266402
• End bp: 1267097
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637125836
• Product: ABC transporter, ATP-binding protein
• Protein accession: NP_952215
• Protein GI: 39996264
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0787551
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAAA CGCGGGAACC CATCGTCGCC ATCCGCAATC TTTCCAAGTC CTACCGCCGG 
GGGGCGCAAC TGATCCCGGT CCTCCAGGAC ATTACCCTGG ACATTGCCGC CGGGGAGTTC 
CTGGCGCTCA TGGGACCGTC CGGCTCGGGT AAAAGCACGC TCCTGAACCT GGTTGCAGGG 
ATCGACAAGG CCGACGCGGG GACCATCACC ATAGGCGGCG TGGAGATCAC GACCCTCTCC 
GAGGCCGCAC TGGCCTCCTG GCGAGCCGCG CACGTGGGGT TCATCTTCCA ATTCTACAAC 
CTGATTCCGG TATTGACGGC CTTCGAAAAC GTGGAGTTGC CGCTGCTCCT GACGGGGCTT 
TCCCGGCGGC AACGGCGCGA GCATGTGGAA ACCGTACTCT CGCTGGTGGG GCTCTCCGAC 
CGGATGGACC ACTACCCCTC CCAGCTTTCG GGGGGACAGC AGCAGCGCGT GGCCGTTGCC 
CGGGCCATGG TGACCGATCC GGATATTCTG GTGGCTGACG AACCCACCGG TGACCTGGAC 
CGGGTTTCGG CAGGAGAGGT GCTGGCCCTC ATGGAACGCC TGGTGTCAGG GTTCGGCAAG 
ACCATCATCA TGGTTACCCA CGATCCCCGG GCTGCAGAGC AGGCCCACCG GCTCCTCCAC 
CTGGAGAAGG GTGAACTGAC CGACGGGGCC GGCTAG 

 

Protein sequence

MSETREPIVA IRNLSKSYRR GAQLIPVLQD ITLDIAAGEF LALMGPSGSG KSTLLNLVAG 
IDKADAGTIT IGGVEITTLS EAALASWRAA HVGFIFQFYN LIPVLTAFEN VELPLLLTGL 
SRRQRREHVE TVLSLVGLSD RMDHYPSQLS GGQQQRVAVA RAMVTDPDIL VADEPTGDLD 
RVSAGEVLAL MERLVSGFGK TIIMVTHDPR AAEQAHRLLH LEKGELTDGA G