| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1161 |
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| Symbol | |
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| ID | 2688426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 1265187 |
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| End bp | 1266401 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637125835 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | NP_952214 |
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| Protein GI | 39996263 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0203325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCATG AGGATCTGCA GAAACTGAAA ATCGACAAAG CGGCGGCACT CCGCCCCGCT
GCCCGGCGCA GGCCCCTCTA CTGGATCGGG GCGGCCGTTG CCCTTGCGCT GCTGCTGGTC
CTGTTCGCAA CCGGCGTTCT CACTCCGGCC GTGACCGTTG AAACCGGCAC GGTGACCCAG
GTGTACCCGT CCCAGACCTT TACCCTGCTC AACGCCAGCG GATACGTGGT GGCCCAGCGT
AAGGCGGCCG TTGCTGCGAA GCTCACTGGC CGGCTGGTCT GGCTCGGCGT AGAGGAGGGG
AGCAGGGTCC GCAAAGGAGA TGTGCTGGCC CGGCTGGAGA GCGACGATGC CGCTGCCGGC
CGGGATCAGG CGGCCGCCAA CCTGGGCACG GCCCGGGCGA GCCTGGACCA GGCCCGGGCC
GAGCTGACCG ATGCCAGCCA GGCCTATGAG CGGCAGAAGC AGCTCGTGCG CGAGGGGATC
GTGGCAAAGG CCGATTTTGA CGCGGCAGAG GCCCGCTTCC TCCGGGCCCG GGCCGCAGTG
ACCGCCGCCG AGTCATCAAT CCGCGCCGCC TCGGCCGCCC TGCGAGGGGC GGAGGTGAAC
CTGGAGTATT CCCTCATCCG CGCCCCCTTC GATGCCGTGG TCCTGACCAA GAATGCGGAC
GTGGGCGACA TCGTCACCCC CATCGGCGCC GCTGCCGACG CCAAGGCCGC CGTGGTCAGC
ATCGCAGACT TGGCATCGCT CCAGGTAGAA GCGGATGTTT CTGAATCCAA CTTGGCCAAG
GTCAAGGAGG GACAGCCGTG CGAGATCCAG CTCGACTCTT TGCCGGATGA GCGCTTCCGG
GGCTTCGTCC ACATGATCGT CCCCACGGCT GATCGCTCCA AGGCGACAGT TCTGGTGAAG
GTCCGCTTTG AGAAACTTGA CCCTCGTATC CTCCCCGAGA TGAGCGCCAA GGTGGCATTT
TTGGAGCGGC CGGTGGCCGC GGGGGAAGAG AAGCCGAAGA CCGCCGTGAA TCCTGCCGCC
GTGGCCGATC GGGACGGCCG CAAGGTCCTT TTCGTTCTGA AGGGAGACCG GGTGGCCGCC
GTGCCCGTGA CCCTCGGCGC CCGCCAGGGA GACATGGTGG AGGTTGTCTC CGGCGCCAAG
GCCGGGGACA GGATCGTCGT CAAGCCCCTG GACAAGCTCA AGGACGGCAC CCGCGTCAAA
ACGGCGGAGA AGTAG
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| Protein sequence | MGHEDLQKLK IDKAAALRPA ARRRPLYWIG AAVALALLLV LFATGVLTPA VTVETGTVTQ
VYPSQTFTLL NASGYVVAQR KAAVAAKLTG RLVWLGVEEG SRVRKGDVLA RLESDDAAAG
RDQAAANLGT ARASLDQARA ELTDASQAYE RQKQLVREGI VAKADFDAAE ARFLRARAAV
TAAESSIRAA SAALRGAEVN LEYSLIRAPF DAVVLTKNAD VGDIVTPIGA AADAKAAVVS
IADLASLQVE ADVSESNLAK VKEGQPCEIQ LDSLPDERFR GFVHMIVPTA DRSKATVLVK
VRFEKLDPRI LPEMSAKVAF LERPVAAGEE KPKTAVNPAA VADRDGRKVL FVLKGDRVAA
VPVTLGARQG DMVEVVSGAK AGDRIVVKPL DKLKDGTRVK TAEK
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