| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1156 |
|---|
| Symbol | asnC |
|---|
| ID | 2685936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 1261648 |
|---|
| End bp | 1263033 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637125830 |
|---|
| Product | asparaginyl-tRNA synthetase |
|---|
| Protein accession | NP_952209 |
|---|
| Protein GI | 39996258 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.154202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAGC GGATACGGAT ACGGGAGATA CTGGCCGGAA CACCAGCCGG TACGGAAGTG
ATCGTCAAGG GGTGGGTCAG GACGAGTCGC GTCGGCAAGG GGGTTGCCTT TCTTGCGGTG
AATGACGGAT CGTGTCTGGC GAGTCTCCAG GTGGTGGCCG AACCGGGACT CGCCAACTAC
CATGAGCTGC GGGGCATCGG CACCGGCGCC GCCGTGGCGG TCCGGGGGAT CGTTGCCGAA
TCGCCGGCCG CGGGGCAGGC CGTCGAACTC CACGCGACGA AGGTGGTCGT GGTCGGAGGC
GCCGACGAAC AGTATCCCCT GCAGAAGAAG CGCCACACCT TCGAGTACCT GCGGACCATT
GCCCACTTGC GTCCCCGCTC CAACACCTTC GGCGCGGTGT TCCGCGTCCG CTCGTCGCTG
GCCCAGGCTG TTCACCGTTT CTTTGCCGAA CGGGGCTTTC TCTACGTCCA TACCCCTATC
ATCACCACCA GCGACTGCGA AGGGGCAGGC GAACTGTTCC GGGTCACCAC TCTCGATCCG
TCGGCCCCAC CCATGGCGGA CGGCGCGGTC GATTTCAGCC AGGATTTCTT CGCGGCCCAG
GCGGGGCTCA CCGTCAGCGG CCAGCTTGAG GGTGAACTCT TTGCCCAGGC ATTTTCCGAT
ATTTACACCT TCGGGCCTAC CTTCAGGGCT GAAAATTCCA ACACTCCCCG CCATGCCGCC
GAATTCTGGA TGATCGAGCC CGAAATGGCC TTTGCCGACC TGAGGGACGA TGCCGCGCTG
GCCGAGGATT TTTTCCGTTA CCTGTGTCGC CACGTTCTGG ACAACTGCGC CGAGGACATG
GCCTTTTTCA ACGAACACGT GGACCGTGGG CTACTCGCCC GGGTAGAGCA GGTGGCCGGT
TCATCCTTTG CCATGATGGA GTACGGCGTG GCCATCGAGC ACCTGAAGCG GGCCGCGGTC
CCCTTCGAGT ACCCGGTCGA GTGGGGTCTC GACCTCCAGA CCGAGCATGA GCGTTACCTG
ACCGAGCAGG TGGTGGGCGG GCCGGTCTTC GTGGTCAACT ATCCTCAGGA GATCAAGGCC
TTCTACATGC GCCGGAATGA CGACGGCAGA ACCGTGGCGG CCATGGATCT GCTGGTCCCC
AAGGTGGGCG AGATCATCGG TGGCAGCCAG CGGGAGGAGC GGTACGATCT TCTGGAATCC
CGCATGCGCG AGGGCGGCAT TGCTCCCGAG AGCCTCTGGT GGTACCTGGA CTCCCGCCGC
TGGGGCTCGA CTCCCCACGC CGGTTTCGGC CTCGGTTTCG AGCGTCTCAT TATGTACCTG
ACCGGCATGG AGAATATCCG CGACGTGATC CCGTTCCCCC GTACCCCGCG CCACGCGGAG
TTTTGA
|
|---|
| Protein sequence | MNERIRIREI LAGTPAGTEV IVKGWVRTSR VGKGVAFLAV NDGSCLASLQ VVAEPGLANY
HELRGIGTGA AVAVRGIVAE SPAAGQAVEL HATKVVVVGG ADEQYPLQKK RHTFEYLRTI
AHLRPRSNTF GAVFRVRSSL AQAVHRFFAE RGFLYVHTPI ITTSDCEGAG ELFRVTTLDP
SAPPMADGAV DFSQDFFAAQ AGLTVSGQLE GELFAQAFSD IYTFGPTFRA ENSNTPRHAA
EFWMIEPEMA FADLRDDAAL AEDFFRYLCR HVLDNCAEDM AFFNEHVDRG LLARVEQVAG
SSFAMMEYGV AIEHLKRAAV PFEYPVEWGL DLQTEHERYL TEQVVGGPVF VVNYPQEIKA
FYMRRNDDGR TVAAMDLLVP KVGEIIGGSQ REERYDLLES RMREGGIAPE SLWWYLDSRR
WGSTPHAGFG LGFERLIMYL TGMENIRDVI PFPRTPRHAE F
|
|---|
| |