| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1121 |
|---|
| Symbol | |
|---|
| ID | 2688528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 1204912 |
|---|
| End bp | 1206513 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637125790 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_952174 |
|---|
| Protein GI | 39996223 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2509] Uncharacterized FAD-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCTTT TGGTACGCAA CCTCATTCTC GCCCCGGACC AGGGGGATGA GCTGCTGCGC
GGGATGTTCG CCCGGCGGTT TTCTCTGGAT GAACGGGAGA TCGTCGATTT CCGGCTCGTC
CGCAAGAGTA TCGATGCCCG CCGCAAGTCA CGGATCAAGT TCGTCTGCAC TGTTGAATGC
TCGCTCCTCA ATGAGGCCGC ATTTCTGGCC CGCCACGGCC ACGATCCCGA TGTCGCCGCA
AGTGCTCCGC CGGAACCGCC GGCCTTTCCA TCTCTTGAAT CTTCCCAGCG CATCGTTATC
GTCGGCATGG GGCCCGCCGG GCTTTTTGCG GCACTGCGCC TGGCGGAATA CGGCCTTGTC
GCCACTATCC TCGAACGCGG CCGGCCCGTG GAGGAGCGGG GCAGGGATGT TCAGGCCTTC
TGGGATAGGG GCGTGCTCGA TCCGGAGAGC AACGTCCAGT TCGGGGAAGG GGGCGCCGGA
ACCTTTTCCG ACGGCAAGCT GACCACGAGG GTGAATGACC CGAACATCAG GTACGTACTC
GACAAACTGA TAGGTTTCGG CGCTCCGCCA GAGATCGGCC ATCTTGCCAA GCCCCATATC
GGCACCGACC GTCTACGCTT GGTGGTTGCC TCCATTCGCC GGTGGCTGTT GTCAGCGGGG
TTCGACATCC GGTTCGGCAG CCGTCTGACT GACTTGACAC TTTCCGGCGG AGCGGTGGAG
GCCGCGGTGG TTAACGGGGC TGACGAACTC CCCTGCGATG CGCTTGTTCT CGCTCCGGGC
AACAGCGCCC GCGATACCTA CGAGATGCTG CTGCGCCGGG GGGCGCTTCT CCAACCCAAG
CCCTTCGCCG TGGGAGTGCG GGTGGAGCAT CCCCAGGAAC TCATCAACCG GATCCAATAC
GGCGCGGGCC ACCATCCAAC CCTGCCGCCG GCTGACTACG CCCTGGCCTG GAACAATTCC
CGTACCGGAC GCTCCGCCTA TTCCTTCTGC ATGTGCCCCG GCGGGGTGGT GGTGGCGGGA
ACCTCCGAGG CGGAAGGGGT GGTGACCAAC GGCATGAGCG CCTATCTGCG TAATTCTCCG
TATTCGAACA GCGCCCTGGT GGTTACTGTC GGACCTGATG ATTTCGGAGA CCAGTCCCCC
CTGGCCGGGA TCGGGTTCCA GCGCCGTTTG GAGCGACGCG CCTTTGAGGC GGGCGGTGGG
GATTACCGGG CGCCGGCTCA GAACCTGCTT GCGTTTCTCG GCATGAAAGG GGGGGGGCGG
GGGTTGTCGA GCTATCGCCC CGGCGTTCGC GAGGCGGAGC TGGATCGGGT GCTCCCCACC
GCCGTGACAG AAGCGTTGCG GGAGGGAGTT CGCCATTTCG ACCGGAAGAT GCGGGGCTTC
CTGACCGCCG AAGCAACCCT CACCGCACCG GAGACCCGTA CGTCGGCACC CGTTCGCATT
GTGCGGGGAG AGAACCTGCA ATCAGTGGGG CTCCCCGGTC TTTATCCGGC AGGGGAAGGT
GCCGGCTACG CCGGGGGAAT CATGAGCGCC GCACTGGACG GTATTCGCGT GGCCGACGCC
ATCGCGCGGA GCATATCCGC AGACACAAGG AGAACACTTT GA
|
|---|
| Protein sequence | MPLLVRNLIL APDQGDELLR GMFARRFSLD EREIVDFRLV RKSIDARRKS RIKFVCTVEC
SLLNEAAFLA RHGHDPDVAA SAPPEPPAFP SLESSQRIVI VGMGPAGLFA ALRLAEYGLV
ATILERGRPV EERGRDVQAF WDRGVLDPES NVQFGEGGAG TFSDGKLTTR VNDPNIRYVL
DKLIGFGAPP EIGHLAKPHI GTDRLRLVVA SIRRWLLSAG FDIRFGSRLT DLTLSGGAVE
AAVVNGADEL PCDALVLAPG NSARDTYEML LRRGALLQPK PFAVGVRVEH PQELINRIQY
GAGHHPTLPP ADYALAWNNS RTGRSAYSFC MCPGGVVVAG TSEAEGVVTN GMSAYLRNSP
YSNSALVVTV GPDDFGDQSP LAGIGFQRRL ERRAFEAGGG DYRAPAQNLL AFLGMKGGGR
GLSSYRPGVR EAELDRVLPT AVTEALREGV RHFDRKMRGF LTAEATLTAP ETRTSAPVRI
VRGENLQSVG LPGLYPAGEG AGYAGGIMSA ALDGIRVADA IARSISADTR RTL
|
|---|
| |