| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1114 |
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| Symbol | |
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| ID | 2688540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 1199618 |
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| End bp | 1200517 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637125783 |
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| Product | TPR domain-containing protein |
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| Protein accession | NP_952167 |
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| Protein GI | 39996216 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0729535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCACGG GGGGGCTCTG GCTCCCGCCT GACGGCGCCT GCGTTGACAA TAACCGCCGA
ATCTGGTACG GTTCTGGGTG TGCGGGGCCG TGTGGAGCGC CTTTGGGCGA TGCGCCGGCC
CCGTTTGGAT ACTCTCCGAC GGTTTCGAGG TTGCCAGTGA GATTCACGCG CATACTCCCC
ATGGTTCTCT GCTTCCTCGT GGCCGCTTGC GCCGCGAATG ACGCCTCGCG CAACCAGGCT
TCCTATCACT ATCAGATGGG GCTGTCCCAC CTGGGCGAAA ACGATACGAC CCGCGCCCTT
ATTGAATTCA TCGAAGCAGA GAAAATCACG CCGGATGATC CCATTCTTCT CAACAGCCTC
GGGCTTGCCT ATTTTTACAA GAAGCGCTTT GATCTGGCGG AGTTGAAATT CAGAAAAGCC
ATTTCCCTCA AGCCCGACTA TTCCGATGCC AGGAACAATC TCGGGGTGAA CTATCTGGAA
ATGCAGCGCT GGGATGACGC CATCTCGCAG TTCAAGCTGG TGATGGCGGA TATTCTTTTT
CTCAATCAGG AAGATGCTCG CATCAATCTC GGTCTTGCAT ACCTGGGCAA GGGAGACTTG
CCCCAGGCCC TCGAAACTCT TCGCGCATCT GTCTCTCACA ATCCCCGCAA TCTAATCGCC
CGTGTTGCCA TTGGCCGGGT TTACTTCGCC ATGGACCGGG CCGAAATGGC CATTCAGGAA
TACAGGAAAG CCATCGAAAT TAATAAGAAT TATCAGAATG CCCATTACTA TCTGGCGTTG
GCCCATGTAA AGCAGAAGGA CTACGTGGCA GCGGCGGATG CTTTTCGCGA GGCGATCCGT
ATTGCCCCCG ATTCCGAAAA AGGTCGGCTC TCGCGCGAAT ACCTGGACTC GTTGAAATGA
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| Protein sequence | MGTGGLWLPP DGACVDNNRR IWYGSGCAGP CGAPLGDAPA PFGYSPTVSR LPVRFTRILP
MVLCFLVAAC AANDASRNQA SYHYQMGLSH LGENDTTRAL IEFIEAEKIT PDDPILLNSL
GLAYFYKKRF DLAELKFRKA ISLKPDYSDA RNNLGVNYLE MQRWDDAISQ FKLVMADILF
LNQEDARINL GLAYLGKGDL PQALETLRAS VSHNPRNLIA RVAIGRVYFA MDRAEMAIQE
YRKAIEINKN YQNAHYYLAL AHVKQKDYVA AADAFREAIR IAPDSEKGRL SREYLDSLK
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