Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1105 |
Symbol | pepQ-1 |
ID | 2688567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1190621 |
End bp | 1191814 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637125774 |
Product | xaa-pro dipeptidase |
Protein accession | NP_952158 |
Protein GI | 39996207 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.071673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCATCA CACCAAGGGA AGAGTTGGAC TACCGCATCT CCCGGCTTCA GACATACATG GCCGGGGCAG GGCTCGATGC GGTCATCATC GTTCAGAATG CCGACTTGTT TTATTTCACC GGCACCATCC AGAGCGGCAA CCTCTATGTG CCCGTTGAGG GCGACCCCAT CTACATGGTC CGCAAAGAGC ATTCCCGGGC GCGGATGGAG TCGGGGCTCA AGTTGGTCGT ACCGTTTTCC TCCATGAAGA ACATCCCCGG TATTCTGGCA GACCACGGTT ATTCTCTGCC CGCCCGGATC GGCATGGAGC TCGACGTCGT GCCGGTAGCC TTCTTTGAGC GCTACCGCGC CGTATTTCCC AACGCCGACT TCAGCGATGC AACGCCTCTC ATCCGGCGGG TCAGGATGAT CAAGAGCAAG TACGAGATTC ATCTCCTCCA GGATGCCGCA GTCCAGGTCG ACAAGGTCCA TCGTCGCGCC ATGGAGGTCA TCCGTGAGGG GATGACCGAT CTGGAACTTG CGGCGGAACT GGAGTTCACT GCCCGGAAAG AAGGTCACCA GGGGCTCGTC CGGATGCGCT CTTTCAATTC TGAGCTGTTT TACGCTCATA TTTTTTCAGG GACCGATACA GCGGTCCCTG CCTATGTGGA TACCCCCCTC GGAGGACTTG GGCTCAATCC CTCGTTCGGT CAGGGGGCCG GGCTCAAGCG GATCGAACGC AATGAGCCGA TCATCGTCGA TTTCGCCGGT TGCGTTGACG GCTACCTGGT GGACCAGACA CGCGTCCTGG CCATCGGAGG GATTTCCGAT CGGTTGCGTC GTGCATACGA TGACATGATC AGGGTTCAGG AGCGGATGAT CACGCTGGCT CTCCCCGGCA CGCCGTGGGG CGATGTCTAT GAGGGGTGTC GCACTCTGGC TGAGGAGCTG GGGTATGCCG ACAGCTTCAT GGGCTCCCGT GGCGCCCAGG TTTCCTTTAT CGGTCACGGC ATCGGCATCG AGATAGACGA ATATCCGTTC ATTGCGCGTG GCTTCTCCGA AATGGTCCTT GAGCCGGGCA TGGTTTTCGC TTTCGAGCCG AAGGTCGTTT TCCCGGGCGA AGGAGCCATC GGGATCGAAA ATACCTTTTA TATCTCAAAC TATGAAGGGC TCAAGCAGCT GACATTCTCG GACCAGGAAC TGGTCATTCT CTGA
|
Protein sequence | MRITPREELD YRISRLQTYM AGAGLDAVII VQNADLFYFT GTIQSGNLYV PVEGDPIYMV RKEHSRARME SGLKLVVPFS SMKNIPGILA DHGYSLPARI GMELDVVPVA FFERYRAVFP NADFSDATPL IRRVRMIKSK YEIHLLQDAA VQVDKVHRRA MEVIREGMTD LELAAELEFT ARKEGHQGLV RMRSFNSELF YAHIFSGTDT AVPAYVDTPL GGLGLNPSFG QGAGLKRIER NEPIIVDFAG CVDGYLVDQT RVLAIGGISD RLRRAYDDMI RVQERMITLA LPGTPWGDVY EGCRTLAEEL GYADSFMGSR GAQVSFIGHG IGIEIDEYPF IARGFSEMVL EPGMVFAFEP KVVFPGEGAI GIENTFYISN YEGLKQLTFS DQELVIL
|
| |