Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1103 |
Symbol | |
ID | 2686921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1188772 |
End bp | 1190430 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637125772 |
Product | AMP-binding domain protein |
Protein accession | NP_952156 |
Protein GI | 39996205 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACAAC CGCTTGAATT TACGGTAGGA GGATTGCTTG ACCACATTGC GGCCCGCTAT CCCGACAATG ACGCTCTCGT CTATGTTGAT CGCGGCCTCC GTTACTCCTA TCGCCAGTTC AACGAAGTCT GCCGCGAGGT GGCCAAGGGG CTGCTGCGGC TCGGCGTCAA GAAGGGCGAT CATGTTTCCA TCTGGGCCTA CAATGTCCCC GAATGGGTGA TCCTTCAGTT CGCCACGGCC AAAATCGGCG CTGTGCTCGT AACGGTCAAC ACCAACTACA AATCGGCGGA GCTGGAGTAT ATCCTCAACC AATCCGACTC TTCGACGCTC TTCCTTGTGA AATCGTTCAA GGATACCGAT TATGTGGCCA CCGTGAACGA GGTCGTGCCC GAGCTGGCCG GGTCGGAAGC CGGCGCCCTT TCCAGTCCGA AACTCCCTTT CCTCAGGAAT GTCGTCTTCA TCGGCAGCGA GACGCCGGCT GGCATGCTCA ATTTCGAGGC AATTGCCGCC ATGGGTCAGG ATGTCTCCGA TGCCGAACTG GCGGCTGTTG AGGCAACCCT CGATCGCCAC GACGTCATCA ATATGCAGTA CACCTCGGGC ACCACCGGCT TTCCCAAGGG GGTCATGCTG ACCCACTTCA ACATCATCAA CAACGGCTTC AACATCGGTG AATGCATGAA GTTCACCGAG AAGGACCGGC TCTGCATCCC GGTCCCCTTT TTCCACTGCT TCGGCTGCGT GCTCGGCGTC ATGGCCTGCG TCACCCACGG CACGACCATG GTGCCGGTGG AGATTTTCGA CCCCCTCTCG GTGCTGCGCA CCATCGAAAA GGAGCGCTGC ACTGCGGTTC ACGGCGTTCC CACCATGTTT ATCGCGGAGC TGGAGCACCC GGACTTTCCG AAGTTCGATC TCACGAGTCT CCGCACCGGG ATCATGGCCG GCTCCAACTG CCCCATCGAG GTAATGAAAA AGGTCATCAG CCAGATGAAC GCCAGCGAAA TCACCATCGC CTACGGCCAG ACCGAGTCGT CGCCCGTGAT CACCCAGACC CGCACCGACG ATGCCATCGA GCTCCGGGTG GCCACGGTCG GCCGGGCGCT TCCCGACGTG GAGGTCAAGA TCGTCGATAT CGAAACCGGT GCCGAACTGC CGCCGGGCAA GCAGGGCGAG CTGTGCACCC GCGGATACCT GGTCATGAAG GGGTACTATA AAATGCCCGA GGAGACTGCG CGGGCAATCG ATGCCGACGG CTGGCTCCAC ACGGGTGACC TGGCCGTCAT GGATGAGAAC GGCTACTGCA AGATCACCGG TCGGATCAAG AATATGATCA TTCGAGGCGG TGAGAATATC TATCCTCGCG AGATAGAGGA GTTTCTCTAT ACCCACCCGA AAATATCAGA TGTTCAGATC TATGGCGTCC CCGACCGCAA GTACGGGGAG CAGGTCATGG CCGCGGTCAT TCTCAAGAAG GGCGACACCA TGACCGAAGA GGATGTGCGT GATTTCTGCA GGGGCAAGAT CGCCAACTAC AAGATTCCCA AGTACGTTAA ATTCGTCGAT TCCTACCCCA TGACCGCCTC TGGCAAGATC CAGAAGTTCA AGCTGCGGGA AATGGCCATC AAGGAGCTCG GCCTCGAAGG GCCGGGGGAA ACCGCTTGA
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Protein sequence | MAQPLEFTVG GLLDHIAARY PDNDALVYVD RGLRYSYRQF NEVCREVAKG LLRLGVKKGD HVSIWAYNVP EWVILQFATA KIGAVLVTVN TNYKSAELEY ILNQSDSSTL FLVKSFKDTD YVATVNEVVP ELAGSEAGAL SSPKLPFLRN VVFIGSETPA GMLNFEAIAA MGQDVSDAEL AAVEATLDRH DVINMQYTSG TTGFPKGVML THFNIINNGF NIGECMKFTE KDRLCIPVPF FHCFGCVLGV MACVTHGTTM VPVEIFDPLS VLRTIEKERC TAVHGVPTMF IAELEHPDFP KFDLTSLRTG IMAGSNCPIE VMKKVISQMN ASEITIAYGQ TESSPVITQT RTDDAIELRV ATVGRALPDV EVKIVDIETG AELPPGKQGE LCTRGYLVMK GYYKMPEETA RAIDADGWLH TGDLAVMDEN GYCKITGRIK NMIIRGGENI YPREIEEFLY THPKISDVQI YGVPDRKYGE QVMAAVILKK GDTMTEEDVR DFCRGKIANY KIPKYVKFVD SYPMTASGKI QKFKLREMAI KELGLEGPGE TA
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