| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1074 |
|---|
| Symbol | |
|---|
| ID | 2688637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 1163086 |
|---|
| End bp | 1163829 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637125743 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_952127 |
|---|
| Protein GI | 39996176 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0217] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.414553 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGGAC ATAATAAATG GAGCACCATC AGGCATAAGA AGGGGGCGGC CGACGCCAAG
CGCGGCAAGG TGTTCACCAA GCTGATCAAG GAGATCACCG TTGCCGCCAA GATCGGCGGT
GGCGACCCGA ACGGCAATCC GCGCCTGCGT GCCGCCGTCG ACAAGGCCAA AGCCGAGAAC
ATGCCCAAGG ACAACATCGA GCGGGCCATC AAGAAGGGGA CTGGCGAACT CGAGGGGGTC
AGCTACGAAG AGATCATCTA CGAAGGATAC GGTCCCGGCG GCGTGGCGGT GCTGGTAGAG
TGCATGACCG ACAACCGTAA CCGTACGGTC GGCGAGGTGC GGAGCACCTT CACCAAGTGC
AACGGCAACA TGGGCGAGGC GGGGTGCGTT TCGTGGATGT TCGACAAGAA AGGGCTCATT
GTCCTGTCCA AGGACGTTGA TTTCGAAAAG CTCTTCGAGA CGGCCCTTGA GGCCGGCGCG
GACGACGTGG CGGACGAAGA GGAGCAGTAC GAGGTGCTCA CCGACCCGGC AGCGTTCATT
GACGTGCGCG AGGCACTCGA AAAGGCCGGC TTCCCCTTCG AATCCGCCGA AATCACCATG
ATTCCCCAGA CCATGGTGAA ACTTGACGGC AAGAATGCCG AGAACATGCT CAAGCTCATG
GACCGCCTCG AGGACAACGA CGACGTCCAG AACGTCTACG CCAACTTCGA CATCTCCACG
GAGGAGATGG AAAAGCTCAT GTAG
|
|---|
| Protein sequence | MSGHNKWSTI RHKKGAADAK RGKVFTKLIK EITVAAKIGG GDPNGNPRLR AAVDKAKAEN
MPKDNIERAI KKGTGELEGV SYEEIIYEGY GPGGVAVLVE CMTDNRNRTV GEVRSTFTKC
NGNMGEAGCV SWMFDKKGLI VLSKDVDFEK LFETALEAGA DDVADEEEQY EVLTDPAAFI
DVREALEKAG FPFESAEITM IPQTMVKLDG KNAENMLKLM DRLEDNDDVQ NVYANFDIST
EEMEKLM
|
|---|
| |