| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1066 |
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| Symbol | |
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| ID | 2688650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 1151571 |
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| End bp | 1154615 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637125735 |
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| Product | hypothetical protein |
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| Protein accession | NP_952119 |
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| Protein GI | 39996168 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.797091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCG ACAATACGAC TCTCAGGAAA TTTGCCCTGC TGGCTGCGGC GATGGCCTTT
GCCGGAATCG TCGCTTCCCT GGCACTGGCA GCGGTCTCGC AGATCCCTCT GTTCCTGCTC
AATATCTCCC AGCCCAATGT CATGATCCTG CTCGACAACT CGGGCAGCAT GGACATCATC
ATGCAGCACT CGGCGTTCGA TCCCACTGCC CGTTACAGCG GCGGGTTCGA CAACGATCGG
ACCTACTATC AGACAACCAG TAACGGCTAT CACTATCTGT CGACCGGAAA CGACTATATC
CGGGACGACA AAAAGGGCAA CTTCACTAAA AACAGCGTCA CCATCAAGCT TCCGCTTCCC
TATGACGATA CCCGCTGGGA CGGGAACTAT CTCAACTGGC TGTTTTATCA TGCGACATCG
AGCCAGCGCA GCACGGTGAG CACGGATGCA ACGCTCCAGA AAACCCGGAT CCAGACGGCG
CGAGGGGTCA TCAGCAATCT GGTCAAGACC GTGTCAGGCG TCAGGTTCGG GCTGGCGAAA
CTGAATGTGG ACGGCTATGA CAGGTTCGAC AGGAAGCAGA CTGACGGCGG GAGCATTGTC
AGAAACTGCG GCGACCTGAC CTCGGCCAAC GTCGATACGA GCGTGAGCGG GATCAGCGCC
GAAACCTGGA CCCCCCTGGG CGAGGCCTTG TCGGAGGTCT GGCAGTACTT CAAAGGGGGG
ACCTCTCTCT ATAACACCGG CGTTTCCTAT ACGAGCCCCA TCACCTCCAG TTGCCAGAAG
AGCTTCACCA TTGTGGTGAC CGATGGCGAG CCGACCTATG ACGGCTGCTA CCGTGGAGAC
TTCAGCTCCT ACGGGTGCGA CAACGCCGCG GATGCCGACA GCCACCTGGC CGATGTGGCC
GCCCATATGA ACGGCAGCGA CGCAACCTCA GCCTATGGCG GCACCCAGAG CGTCACCACC
TACACCATTG GCATGACCAT TGACAGCAGC CTGCTCCGGA CCACCGCCGA GAACGGCGGC
GGCTCCTACT ATACCACCAC GTCGGGCATG GACCTGGCAA CGGCTCTCCA GAACGCCGTC
AACGAGATCC TCGGCAGACA GTCTTCCGCC AGCGCCGTGG CGGTCAGCAC CGCATATCTC
ACCTCAAACA CCACGCTCTA CCGGGCCCGG TTCGATTCGA CCGACTGGAG CGGCTACCTG
GAGGCCTACG GCATCAACAA GGCAAACGGT GCCGTTACCG GCTATCCCAA TTCGCCGAAG
TGGGAGGCCG GGGCGCTGCT GAATGCCAAT TCCGCCCGCA CTGTCTATAC TGCCGGCGTC
CAATCGGGAG TGTACCGGCG GGTCGACTTT ACCTCCACCA ATGCAGCCAC CCTTGCTCCT
GCCGGGTTCA TGAATTTCTC GTCGGCAAGC ACCGCGTCCA TGATCGGCTA CGTGCGGGGC
GACGTCGAAC CGGCCGGTTA TCGGCATCGG GCGAGCAAGC TCGGCGACAT GGTCCAGTCG
GCTCCGGTCA TTCTCGGGCC GCCGGACGGT TACTACAGCG ACAACAACTA CGCCACGTTC
AAGCGAAACA ACGCCACGCG CCAGTCGCTG ATCCTAGCCG GGGCCAACGA CGGGATGCTG
CACGCGTTCA ATGCCGACAC CGGTGCCGAG GAGTGGGCCT TTATTCCGAA TATTCTCCTG
CCCAAGCTGA AACTGCTCCG TGCCACCCCG TATACTCACA CCAACTACGT CAACGGCGCG
ATCACGGTGG GCGATGCGTT CATTACCGCC AAAGGCCTCG ACGGCAAGTC CGAAACATCG
TCTTCCTGGC GTACCATTGC GGTCTGCGGC CTGCGGGAGG GAGGCAAGGG CTATTTCGCC
CTGGATGTGA CCGACGCCGC CAACCCGATT CCCCTCTGGG AGATCACCAA TACTTCACCA
AGCGAAACGA GCGGTACAGT GGTGGGGCTG GGATACTCCT TCGGCACCCC CCTGATCGTC
AAACTCAAGG ATAGTTCCCA GTCGGGCGGC TTCCGCTGGG TTGCGCTGCT GGCCAACGGT
TACGAGGGGA CCACCTCGGG GCGTGCCGCC ACCCTGATTG TGGCTGACCT GGCAACGGGT
GCGGTCATTC GGGAAATCGT CGCGGACGCG AGCACCTTCA GCGGCGTCTC GCCCAACGGC
CTCGCCACGC CGGCCGCCAT TGACAGGGAT GCCGATGGCT TTGTGGACTA TGTGTATGCC
GGAGATTTGA CCGGCCACCT CTGGAAGTTC GACCTCTCCA GCAGTAACAG CAACAACTGG
GACGTGGTCT GGAAACGCTC GGGGACTCCC GTGGCCCTGT GCCGGGCGAA AACTGCCGCC
GGCAGCGTCC AGCCGATCAC CACGGCCCCC GACGTGGTTC TGCGCGGCGG CTACCAGATC
GTCTTTTTCG GTACCGGCAA ATACTATGAG TCCACGGACA TCTCATCTAC CCAGCCCCAG
ACCTTTTATG GGGCCTACGA TTACAACAGC ACCACCACTC CCACCAGTGC CCAGGCCACT
AACGGGGCCC TGCTCACCCG CGCCGACCTG ACCGCCCAGA CGGTTACCAG GATTGACGAG
AGCGGAACCA GTTGGCGCAC CTCGTCGAAC AATCCGATCG GCCTGACCAA GGGATGGTAT
CTGGACCTCC CCGTGGCCGG GGAGCGGGTG ATCACCGACC CGGTGGCCCG GTCGCGCAAG
ATCATCTTCA CCACCTTCAT CCCCAATACC GATGCCTGCA GCTTCGGCGG GATCAGCTGG
CTCATGGAAC TGAACATGGA CACCGGCGGG GAAGTGGTCA GGCCGGTATT CGATGTGAAT
CTGGACGGGA AGGTGGATTA TAGCGACACG GTACTCGGAG ATCTCAAGGT GAAGCCCACC
GGCACCCTCC TGGGGGACGG TCTCGCATCG ACGCCTGCCA TCGTGGGGGC CGGAGATGAG
CACGAGTACA AGTACATCAC CAAGACCACG GGGGAAATCA TCAAACTGCT GGAGGGGGGC
GGGCATAGCC AGATCGGCCT GCGAAGCTGG CGCCAGCTCA AGTGA
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| Protein sequence | MSTDNTTLRK FALLAAAMAF AGIVASLALA AVSQIPLFLL NISQPNVMIL LDNSGSMDII
MQHSAFDPTA RYSGGFDNDR TYYQTTSNGY HYLSTGNDYI RDDKKGNFTK NSVTIKLPLP
YDDTRWDGNY LNWLFYHATS SQRSTVSTDA TLQKTRIQTA RGVISNLVKT VSGVRFGLAK
LNVDGYDRFD RKQTDGGSIV RNCGDLTSAN VDTSVSGISA ETWTPLGEAL SEVWQYFKGG
TSLYNTGVSY TSPITSSCQK SFTIVVTDGE PTYDGCYRGD FSSYGCDNAA DADSHLADVA
AHMNGSDATS AYGGTQSVTT YTIGMTIDSS LLRTTAENGG GSYYTTTSGM DLATALQNAV
NEILGRQSSA SAVAVSTAYL TSNTTLYRAR FDSTDWSGYL EAYGINKANG AVTGYPNSPK
WEAGALLNAN SARTVYTAGV QSGVYRRVDF TSTNAATLAP AGFMNFSSAS TASMIGYVRG
DVEPAGYRHR ASKLGDMVQS APVILGPPDG YYSDNNYATF KRNNATRQSL ILAGANDGML
HAFNADTGAE EWAFIPNILL PKLKLLRATP YTHTNYVNGA ITVGDAFITA KGLDGKSETS
SSWRTIAVCG LREGGKGYFA LDVTDAANPI PLWEITNTSP SETSGTVVGL GYSFGTPLIV
KLKDSSQSGG FRWVALLANG YEGTTSGRAA TLIVADLATG AVIREIVADA STFSGVSPNG
LATPAAIDRD ADGFVDYVYA GDLTGHLWKF DLSSSNSNNW DVVWKRSGTP VALCRAKTAA
GSVQPITTAP DVVLRGGYQI VFFGTGKYYE STDISSTQPQ TFYGAYDYNS TTTPTSAQAT
NGALLTRADL TAQTVTRIDE SGTSWRTSSN NPIGLTKGWY LDLPVAGERV ITDPVARSRK
IIFTTFIPNT DACSFGGISW LMELNMDTGG EVVRPVFDVN LDGKVDYSDT VLGDLKVKPT
GTLLGDGLAS TPAIVGAGDE HEYKYITKTT GEIIKLLEGG GHSQIGLRSW RQLK
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