Gene GSU1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1053 
Symbol 
ID2685675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp1140250 
End bp1141311 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content60% 
IMG OID637125722 
Productsensory box protein 
Protein accessionNP_952106 
Protein GI39996155 
COG category[T] Signal transduction mechanisms 
COG ID[COG2202] FOG: PAS/PAC domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCTCA TTGATACGTT GAAATCATTT TTCGGCAATC TGTCCGGCAG GGACGAGATA 
CGCCGGCTCC GCAGGGAAAA CGAGGAACTG GCCGAGCGGG AGCGCAAGGC TATCGCCTAT
ATCCGGGAGA AGACGAACCA CCTGCTGACC ACCATCGGTA CCCTCCCCCT GCGCCACGAA
GAGCTTGACG ACCGCAGCCT GCTGGAAGTG GATCCCATCG GCATCGTCTG CGATTCCTTC
GAACAGATTC TTGAGCACAT GAAAGAGGTG AATGCCGAGC TGAAGCTGGC CCATGACGAG
ATCCAGGGAA TCTTCGACTG TTCCGACGCC GCCATTTTCG TGCTGGACAC CTCGATGAAC
ATCCAGGCGA GCAACTCCCA GGCCCGGAAA ATATTCGCCT ACGACGGCAA CCCCATCGGG
AAGACCTGCG ACGAAATCAT CTGCCGCACG AAATATCCCG AAGGCTGCAT TTTCACGAGC
ATCATAGCCT CGAAACGCGC CGAGCGGCGC AGCGAGTGCG GCCGCGTCGG GAGATGGTTC
AACGTCCACG GCGCCCCCAT CAAGAACCGC TTCGGCGACA TCACCCACGT GGTTCTCTTC
TACACGGACA TTACCGAGGA GAAGCGGGTG CTCGATACGC TCCGCGAACG CGAGGGGATG
TATGACCTGA TCCTCGACAA TGCCAGCGAC TTGTTCCAGA GCATAGCCAT CGACGGTTCA
ATCAACTATG TGAACCGGGC ATGGCGTACC ACTCTGGGCT ACACTGACGA CGATCTCGCC
ACGCTCTCAA TCTTCGACGT CATTCATCCT GAGTCCGTGG ATCATTGCCG CGAGATATTC
ATGAGACTGC TGGCCGGCGC GCGTTCAGGG CCGGTCTCCT TCTCGTTCGT AACAAAACAC
GGCCGGATCG TACCGGTCAC CGGCTCCGTA TCGTGCAATT TCCGGGACGG GAAACCCTAT
GCCACCTGCG GCATTTTCCA CATCATGTCC GGCGTCGGCC AGGACAACGC CACCGCCGGC
CCCGACAAGG AGAGCCGGGC CGGCGGCCAG CGCGCCGGCT GA
 
Protein sequence
MGLIDTLKSF FGNLSGRDEI RRLRRENEEL AERERKAIAY IREKTNHLLT TIGTLPLRHE 
ELDDRSLLEV DPIGIVCDSF EQILEHMKEV NAELKLAHDE IQGIFDCSDA AIFVLDTSMN
IQASNSQARK IFAYDGNPIG KTCDEIICRT KYPEGCIFTS IIASKRAERR SECGRVGRWF
NVHGAPIKNR FGDITHVVLF YTDITEEKRV LDTLREREGM YDLILDNASD LFQSIAIDGS
INYVNRAWRT TLGYTDDDLA TLSIFDVIHP ESVDHCREIF MRLLAGARSG PVSFSFVTKH
GRIVPVTGSV SCNFRDGKPY ATCGIFHIMS GVGQDNATAG PDKESRAGGQ RAG