| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1043 |
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| Symbol | |
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| ID | 2686972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 1129626 |
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| End bp | 1131929 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637125712 |
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| Product | sensory box histidine kinase |
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| Protein accession | NP_952096 |
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| Protein GI | 39996145 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.382651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAGA ACAGGAACTC GTCTGAAACC GTACCGCTCC TCGTCATAGG AACCGGAATC
ATCGTCGCGC TCTACCTGAC GAGCTTTTAC AGCTTCGTGC TGTTCCACGT CCTAGTTGAA
TTCTTCTCCG TGGTCGTGTC GGGCGCGATC TTCGTCATCG CCTGGAACTC GCGCCGCTTT
GCCGCCAACG GGTACCTGCT GGTCATCGGC ATCGCCCACC TCTGCGTCGG CAGCATCGAC
CTGCTGCACA CCATCGCCTA CAAGGGCATG GGGCTCTTCC CCGGCTTCGA CGCCAACCTC
CCCACCCAAC TCTGGATAGC CGGGCGCTAC CTGCAGAGCG CCTCGTTCCT CCTGGCACCT
TTCTTCATCG GCCGCCGGCT CCTGTCGCGC ACCCTGCTGA CTGCATACCT GGCCGTCACC
TCGCTGCTGC TCGCCGCCAT CTTTGTCTGG CAGATCTTTC CCGTCTGCTT CGTGGAGGGA
GTGGGGCTTA CCCCCTTCAA AAGGGTCAGC GAATACATCA TCTCCGCAAC ATTCGTGGCG
GCCCTGGTCC TGTTGCGAGT CAAGCGCAGG GCGTTCGACC GCCGGGTCGC CAATTATCTG
TCGGGAGCCA TTGCTCTCAT GGTGGGCGCC GAACTGGCCT TCACCTTCTA CATCGACGTC
TACGGCCTGA GCAATCTGGT CGGCCACCTG TTCAAGGCGG CGGCCGTGCT GCTCATCTAC
CGGGGGCTGG TCGAGACGGC CCTGACCCGC CCCTACGATA TCCTGTTCCG GGAACTGACG
GAACGGGAAG AGGCCGTGCG GGAGTCCCAC CAGCGCATCT CCACCATCCT CGAAAGCATT
ACCGATGCGT TCTTTTCACT GGATCACTCA TGGCGCTTCA CCTACCTGAA CGGGGAGGCG
GAGCGATTGC TCGGGCGCAC CCGAGACGAC CTGCTGGGAA AGAGTATCTG GGAGGAATTC
GCCGCCGCCG TGGGCACAAG GTTTGACGTC GAGTACCGTC GCGCCGTGGC AAGCGGAACG
ACTGCCACGT TCGAGGAGTA CTACCCTCCC CTCGCCTGCT GGTTCGAAGT CCACGCCTAC
CCCTCGCGGG ATGGGCTCTC GGTCTTTTTC CAGGACATTA CCACCCGTAA GCGGGCCGAA
GCCGAGCTCC GCGCTTCGGA AGAGCGCTTT GCAAAGGCAT TCAACACCGC GCCCACCATC
ATGATCATCG CATCCCTTGT CGACGGACGG TACCTGGAGG TAAACGGAGC GTTCGAAAAA
ACCCTTGGCT GGCGGAAGGA AGAGGTGCTC GGCCGCACAT CGTACGACCT CGGCATCTGG
ATTGACACCG CCGAACGCGA AAACATCCTG CGCGAGGTTG CCGAACAGGG ATCGGTCCAT
GACCGGGAAA TCCAGTTCCG CAGCAGGAAC GGTGAAACGA TCATCGGCCT TTACTCGGGC
GTCATCATTG AACTGAACGG CAAGCAGTGC CTGTTAAGCA TTGTACGGAA CATTACTGCC
CGCAAGCGGG CCGAGCAGCA GATCGTCATC CTCAACAAGG AATTGGAGGA CCGGGCGGAG
GTGCTGGAGG AAACCAACTG CGAACTGGAG ACGAGTGTCG AGCAACTGGA AGCGGTAAAC
CGCGAACTTG AGGACGCCAA CGAAGAGCTG GAGGCGTTCA ACTATTCAGT CTCTCATGAC
CTGCGCCGTC CCCTCACCAA CATCAACGGG TTCTCCCAGC TCATCCTGGA GTTGTACGGC
CGTCAACTGG AGGCACAGTG CCGCGATTTC GTCCGCTGCA TTTACGACGA AACGCGCAAC
ATGGATCGCC TTATCGGGAC ACTGCTCAAC TTTTCCCGGA TCTCGCGCTG TGCGATGAAG
CCCGAAACGG TCGACCTGAG CACCATGGCC CGGCAGATAA CCGAAACCCT GAAAATAGGC
GAGCCGGAGC GCAAGGTCAG CTTCCACCTG ACCGAGGGAA TAACGGCCCG GGGAGACGCG
GGGCTGCTCC ATATCGTACT CGACAACCTG GTGGGAAATG CGTGGAAATA CAGCAGCAAG
CAGGAAGACG CCCGCATCGA GTTCGGCGTG ACCGACAGGA GCGGCACCGT CGCCTACTTC
GTGCGCGACA ACGGAGCCGG CTTTGACATG GAGTTCGCGC AACAGCTGTT CACGCCGTTC
CAGAGGCTCC ATCACAGCGA GGATTTCGAA GGGCACGGCA TCGGCCTTGC CACGGTGGCG
CGGATCATCC AGCGCCACGG CGGAAAGGTC TGGGCGGAAG GAGAGGTAGG ACAGGGAGCT
ACCTTTTACT TCACCCTCTG CTGA
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| Protein sequence | MIENRNSSET VPLLVIGTGI IVALYLTSFY SFVLFHVLVE FFSVVVSGAI FVIAWNSRRF
AANGYLLVIG IAHLCVGSID LLHTIAYKGM GLFPGFDANL PTQLWIAGRY LQSASFLLAP
FFIGRRLLSR TLLTAYLAVT SLLLAAIFVW QIFPVCFVEG VGLTPFKRVS EYIISATFVA
ALVLLRVKRR AFDRRVANYL SGAIALMVGA ELAFTFYIDV YGLSNLVGHL FKAAAVLLIY
RGLVETALTR PYDILFRELT EREEAVRESH QRISTILESI TDAFFSLDHS WRFTYLNGEA
ERLLGRTRDD LLGKSIWEEF AAAVGTRFDV EYRRAVASGT TATFEEYYPP LACWFEVHAY
PSRDGLSVFF QDITTRKRAE AELRASEERF AKAFNTAPTI MIIASLVDGR YLEVNGAFEK
TLGWRKEEVL GRTSYDLGIW IDTAERENIL REVAEQGSVH DREIQFRSRN GETIIGLYSG
VIIELNGKQC LLSIVRNITA RKRAEQQIVI LNKELEDRAE VLEETNCELE TSVEQLEAVN
RELEDANEEL EAFNYSVSHD LRRPLTNING FSQLILELYG RQLEAQCRDF VRCIYDETRN
MDRLIGTLLN FSRISRCAMK PETVDLSTMA RQITETLKIG EPERKVSFHL TEGITARGDA
GLLHIVLDNL VGNAWKYSSK QEDARIEFGV TDRSGTVAYF VRDNGAGFDM EFAQQLFTPF
QRLHHSEDFE GHGIGLATVA RIIQRHGGKV WAEGEVGQGA TFYFTLC
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