Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0969 |
Symbol | ctpA-1 |
ID | 2685693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1043393 |
End bp | 1044745 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637125639 |
Product | carboxy-terminal processing protease |
Protein accession | NP_952023 |
Protein GI | 39996072 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACGA GAACGAGGAT AACCCTCGGC CTGGTGGTTG CCATACTCTG CCTCACCATC GGCGTGGCCG CCGGATGGCG CTACTATAAC CCTGCTGCCG ACCAGGTCGG TGCCGAGCAC CTGAGACTGT TCCGCGAGGT CGTCTCGATC GTGCGGAGCA GTTACGTGGA AGAGGTGAGC GGGAAAAAGC TGCTGGAAGG GGCCATCAAC GGCATGCTCG CCTCGCTGGA CCCCCACAGC TCGTATCTTC CGCCGGAACC CTTCACCGAA ATGAAGACGG AGATATCGGG GTCCTTCGGC GGCCTCGGCA TCGAGATCTC CATGCGTGAC GGCAAACTGA CCGTAGTTGC CCCCATCGAG GATACTCCCG CCTGGCGGGC CGGAATCCAG TCGGGCGACC ACATCTGGAA GATCGACGAT ACTCCCACCC GCGGTCTCAC CATCACCCAG GCGGTCAAGC AGATGAGGGG CGAGAAGGGG ACCCAGGTCT CCCTCTCGAT TCTGCGGAAC GGGAACGGAA AACCTCTCGT GTTCCCCCTG GTGCGGGACA TCATCAAGAC CAGGAGCCTC AAATCCCGGA CTCTGGAGCC GGGTTACGGC TATGTCAGGA TAAGCCAGTT CCAAGAGCGG ACAGGGGATG ACTTTGCCGC TGCTCTTGCC AAGCTTCGGT CAGATAACGG CGGGTCCCTC AAGGGGCTCG TGCTCGATCT GCGGAATAAT CCCGGCGGCC TTCTGGATGC CGCAGTGGCG GTGGCGGGGC GCTTCGTGGG TGAACGCCTC GACAACGGCC TCATCGTCTA TACCGAAGGG CGCGAGCACT TTGCCAAGCG AAGCTACAGC GCCACCATCG GCGAGAAAGA GCCGCGCTAC CCCCTTGTCG TCCTTATCAA CGGCGGCAGC GCCAGCGCCT CGGAGATCGT GGCCGGTGCC CTCCAGGACC ACGGCCGCGC CGTCATCATG GGAACCACCA GCTTCGGCAA GGGATCGGTT CAGACGGTGG TCCCCCTCAA GGATGGCGCC GGTCTCAAGC TGACCACGGC CCGTTACTAC ACCCCCAAGG GACGTTCGAT CCAGGCACGG GGCATCGAGC CCGACATCGT CGTAGAACGG GCCGGGTTCA AGGAACTGCC GGACAAGGGC AGGGCCGGAT TCCTCGAAAA GGATTTGGAC AACCATCTGT CCGGGGCGGA ATCGGGCGAG GGGGAAAAGA CCCCCGAGCA GGACGTGAAA AAGCTCCCGG CGGCGCCGGC GACTCCCGAA CACGAGGTTG ACAAGGATTA TCAGCTTCTT CGGGCCCTTG AACTGCTCAA GGGCTGGGAT GCCATGCGCA AGGTGGCCAC CGCGAAGCAC TAG
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Protein sequence | MQTRTRITLG LVVAILCLTI GVAAGWRYYN PAADQVGAEH LRLFREVVSI VRSSYVEEVS GKKLLEGAIN GMLASLDPHS SYLPPEPFTE MKTEISGSFG GLGIEISMRD GKLTVVAPIE DTPAWRAGIQ SGDHIWKIDD TPTRGLTITQ AVKQMRGEKG TQVSLSILRN GNGKPLVFPL VRDIIKTRSL KSRTLEPGYG YVRISQFQER TGDDFAAALA KLRSDNGGSL KGLVLDLRNN PGGLLDAAVA VAGRFVGERL DNGLIVYTEG REHFAKRSYS ATIGEKEPRY PLVVLINGGS ASASEIVAGA LQDHGRAVIM GTTSFGKGSV QTVVPLKDGA GLKLTTARYY TPKGRSIQAR GIEPDIVVER AGFKELPDKG RAGFLEKDLD NHLSGAESGE GEKTPEQDVK KLPAAPATPE HEVDKDYQLL RALELLKGWD AMRKVATAKH
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