| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0955 |
|---|
| Symbol | |
|---|
| ID | 2685307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 1029182 |
|---|
| End bp | 1030486 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637125625 |
|---|
| Product | group II intron, maturase |
|---|
| Protein accession | NP_952009 |
|---|
| Protein GI | 39996058 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3344] Retron-type reverse transcriptase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGTGG AGCGCGTCAT TGACCGGCCA ACTCCGGAAG AGCACCTACT GGAGCGGATA
CTTGCCACAG AGAACATGGA CCTGGCGTGG AAACGGGTGC GGGCCAACAA GGGCGCACCT
GGCGTCGATG GTGTTACCAT CGACGCGTTC CCCGAACGGT TCCGGCCCCT CTGGGGCGAT
ATCCGTGCAT CGCTTGCAAC AGGTACCTAC CAACCACAGC CGGTCCTTCG AGTGGAAATA
CCCAAACCAA CGGGCGGCAC CCGCCCGCTG GGGATTCCCA CCGTCCTTGA CCGGCTGATC
CAACAGGCAA CAGCCCAGGT GCTCACGCCG ATCTTCGATC CGGAATTCTC CGCATCGAGT
TTCGGGTTCC GCCCCGGCCG CTCGGCACAC AATGCCGTGC GGCAGCTGCG GGAGTATCTG
CGGCAGGGCT ACCGCATTGC CGTGGACATC GACCTTGCCA AGTTCTTCGA CACGGTCAAT
CACGACCTCC TCATGACAAT GGTGGGGAGG AGGGTCCGCG ACAAGCGGGT TCTCACCCTG
ATCGGCAGGT ATCTCAGAGC CGGGGTGGAG GTTGACGGGC GGCTGGAAAA GACCCGCATG
GGCGTACCCC AAGGGGGTCC GCTTTCCCCG CTTCTCGCCA ACATCCTCCT CGACCACCTG
GACAAGGAGC TTGAGAGCCG TGGCCACAAG TTCGTCCGTT ACGCCGATGA TTTCGTCATT
CTGGTGAAGA GCGAGCGTGC CGGCGAGCGG GTCATGGGGA GCGTCAGGAA GTATCTGACG
AACAAACTCA AGCTCACGGT CAACGAAGAC AAGAGCAAAG TCGCCAGAAG CGGCGACTTG
AGCTTTCTTG GCTTTGTCTT CAAGGGAACC AAAATCCTCT GGTCTGACCA GGCGTACAAG
GAGTTCCGGC GCCGGGTCAG GAAGTACACC GGCAGGAGTT GGTTCGTCTC CATGGAGTAC
CGACTGAACA AGCTGTCGAC CTACCTCCGC GGCTGGATGG GGTACTTCGG CATTGCCGAA
GCCTACCGTG ACATCCCGGA GATCGACGGC TGGATACGGC GGCGGGTGCG GCTGTGCTAC
TGGAAGCAGT GGCGGTGGTG CCGCACCAAG ATTCGGAACC TGCTCAAACT GGGTGTACAG
CTTGGCACAT CCATCAGAGC AGGGCTGAAC CGCAACGGTC CGTGGGCCAT GTCCCGCAGG
CTTGCCGCCC AGCACGGTAT GACCAACCAG TGGCTGAAGG ATCAAGGACT TGTATCTGTC
AAAGAACTGT GGGTGAAGAT CCATTACCCG GCCACGGCCC GGTAA
|
|---|
| Protein sequence | MPVERVIDRP TPEEHLLERI LATENMDLAW KRVRANKGAP GVDGVTIDAF PERFRPLWGD
IRASLATGTY QPQPVLRVEI PKPTGGTRPL GIPTVLDRLI QQATAQVLTP IFDPEFSASS
FGFRPGRSAH NAVRQLREYL RQGYRIAVDI DLAKFFDTVN HDLLMTMVGR RVRDKRVLTL
IGRYLRAGVE VDGRLEKTRM GVPQGGPLSP LLANILLDHL DKELESRGHK FVRYADDFVI
LVKSERAGER VMGSVRKYLT NKLKLTVNED KSKVARSGDL SFLGFVFKGT KILWSDQAYK
EFRRRVRKYT GRSWFVSMEY RLNKLSTYLR GWMGYFGIAE AYRDIPEIDG WIRRRVRLCY
WKQWRWCRTK IRNLLKLGVQ LGTSIRAGLN RNGPWAMSRR LAAQHGMTNQ WLKDQGLVSV
KELWVKIHYP ATAR
|
|---|
| |