Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0952 |
Symbol | |
ID | 2685769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1024618 |
End bp | 1025910 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637125622 |
Product | GGDEF domain-containing protein |
Protein accession | NP_952006 |
Protein GI | 39996055 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGGCAG AAAAAGAACA GACTGTGGTG GAACGAGTAA AGAGCGCCGA CTATTTCTTC CGATCCCTGG TTCTGGTCGC CGCCCTATCC ATTGGGGCAA TTTTGATGCT TTGCTGTTAC GGCACGTACA AAATTTATTT AAACCATACC ATCGCAACCG CCGAGGAAGA TGCGGTGCAG GTGAGCGAGG CACTGCTGAA ACATGAAGAA GTAAATATTA TGGAGGGAGA TAAGGAAAAG GGTTTTACCG TGACGATTTC CCCGGAAGAA CTGCCTCACG TGGACCAGCG GCTGCGGCAG TTCCTCCGCC CCTTCGGCAT CGTGAAGATC AAGATCTACA ACGAGAAGCG AACCATTGTC TACAGTACTG ACAGCGCCAT TATTGGAAAG CACGACAAGA ATAACGTCCG CCTTGTCCGT GCCTTGCTCG GATTTGTCGA TTCCAAGCTG GAGAAGTCAG AGGATGTGCT TGATATGGCC GAAGAGAAGG TGATTGAGGT TGATGTCGTT GAAACGTACG TTCCTATCAT AGCCGATGAC GGAAGGGTGA TCGGCGCCTT CGAGATATAC ATGGATGTCT CCCGGTACAC GAGCGATGTC CGCAATGTGG TGGTGTCCAC GTTCGCAATC CTCCTGGTTG TATTGCTGTC CGTATTCGGG TGTTCCTTTT TCGTGATACG GCGGATGACC GAACGCCTCA GGGAAGCAGA GGCGGAATTG AAGCGGATTG CGGTTACTGA CCCCCTCACC GGTATTGCCA ACCGGCGCCA GATCATTCAC CGTGCCACCG AGGAGTTTGC TCGGCAGATG AGAAGGAAGC AGCAGCGGAC CGCGGTTCCC AGCCTGGGGA TTATCATGGC GGATGTGGAC CATTTTAAGC AGATCAATGA TACCTACGGT CACAGTGCCG GTGATGACGT CTTGAGGGAG ATAGCCTCGC GGATCGGCTC CGTCCTTCGG CAGTATGATG CCGTGGGACG TTACGGCGGG GAGGAGTTCC TGGTCATCCT CTCCGAGACT GAGTTGGAAG AGACGTGGCA TATTGCCGAG AGGATTCGAC GCCGGGTGGC GGATGATCCG GTGGTCGTCG ATAACCAGGT GATCCGGGTT TCCGCCAGTC TTGGCATCGC CACGGTCCTT GCCGGTGAGG CAGACTACCG GCCCGCGCTT GAGCGTGCCG ATAAGGGGCT CTATCTGGCA AAGACTGCGG GGCGCAACCG GGTCATGTGT GCCGGCGACG AACAATGCCG CGGCGAACGA TCCCGGCCCA AGCTGGAGGC CGTCAAAGGT TAG
|
Protein sequence | MSAEKEQTVV ERVKSADYFF RSLVLVAALS IGAILMLCCY GTYKIYLNHT IATAEEDAVQ VSEALLKHEE VNIMEGDKEK GFTVTISPEE LPHVDQRLRQ FLRPFGIVKI KIYNEKRTIV YSTDSAIIGK HDKNNVRLVR ALLGFVDSKL EKSEDVLDMA EEKVIEVDVV ETYVPIIADD GRVIGAFEIY MDVSRYTSDV RNVVVSTFAI LLVVLLSVFG CSFFVIRRMT ERLREAEAEL KRIAVTDPLT GIANRRQIIH RATEEFARQM RRKQQRTAVP SLGIIMADVD HFKQINDTYG HSAGDDVLRE IASRIGSVLR QYDAVGRYGG EEFLVILSET ELEETWHIAE RIRRRVADDP VVVDNQVIRV SASLGIATVL AGEADYRPAL ERADKGLYLA KTAGRNRVMC AGDEQCRGER SRPKLEAVKG
|
| |