| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0946 |
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| Symbol | |
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| ID | 2685824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 1016762 |
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| End bp | 1019290 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637125616 |
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| Product | sensory box/GGDEF family protein |
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| Protein accession | NP_952000 |
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| Protein GI | 39996049 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTC GGAGCACCCT CACAGCCGGC TGTTTTATCT TCGCCCTGCT CACGGGGCTG
GTCGGCTATT TCGGCGGCAG CGCCATCACC AGGATCAGCG CCGAGTTCGA CGCGGTGACG
CGGGATGGCT TGCCGGCCAT TAGGACTCTC CACGACATCC GCCATGCGGG AGTGCGCATT
GTTGCCTCCA CCAGCGAGTT CGGACTGGTG AGCGTGGTCG GTCGCAACGG CGTTGCTGCC
CGCCATCAGG TTGAGGAAGA AAAAGAGCTC CTGGAACAGG GAGCCGGTCT GTACCAGTCC
GCGTTTTCCA CCCTGAAAGA CCTCTCCGAC CGTCTTGATC CCGAAACACG GCAGTATGTG
CAGGAAATCG ACCGGGCCGG CAGGGATCTC CTGGCGCTGA GCGCAGAGTC CATGGAGACC
GTGCGCCGCG TCAGCTCACC CGCGGCGATT TTGGAGGTAA AGGAGCGCTT CGAGACAGCG
GAGAGACACT TCCTCGACGT TGTCGACCGC GCTCTCGCCC TCGAACGGCG GCGGCTCGTC
ACACGTCAGC AGGAAGTCCA CGATTCCATT ACCCTGGCAC TGTTCACCCT CAGCGCGGCA
TCTGCGGTGG CGCTCCTCTT TGCAATGGGT GGCGGCACCC TCTCGGCGAT ACTGATTTCA
CGTCCCATAG CGCTCCTGCA GGAAGGGGTC GAGCAGGTGG GGCAGGGAAT CCTCGACACC
CGCATCGATA TCAGCGGCAA CAACGAGATC GGCCGGCTCG CCGGCGCCTT CAACCGCATG
ACCACGGAAC TCCGGGCGGC CAAGGACGAA ATCACCACGG CGCGCAACTA CCTGGACAAC
GTGATCTGCT CCATGGCCGA CGCCCTCCTG GTGGTGGATA CCAACGGTAC GGTCATGAAC
GTCAACCCGG CCCTCTGCGG GTTGCTCGGC TACCGGGAGA ACGAGTTGAT CGGCCGTTCC
TTCTCGTCCA TCCTGGCCGA CGGGGGGCAT GGGCAGAGCA TCATTGCCGA GATGGCCGAG
CAGGGGCAGG TTCCCGACCG GGAGCTCCTC TACCGGAGCC GCCAGGGCGA GCTGATCCCG
GTGGTCCTGT CCGGCGGCGC CATGCGGAAC CAGGACGGCG AGGTGTGCGG CATCGTCTGC
ATCGCTCACG ACATGAGGGA ACGCAAGAGA AGTGAAGAGG AAATCCGGCG GCTTGCCTAC
TTCGATCCCC TCACCGGCCT GCCGAACCGG GCACTGTTCC AGGACCGGGT CAGCCACGCC
CTGGCCGTGG CCAGGCGTGA GGAAGGTGCG GTGGCGCTGC TGTTCCTGGA CCTGGACCGG
TTCAAGGACA TCAACGACAC TCTCGGCCAT GCCATGGGAG ATCTGCTCCT GACGTCGGTG
GCCGACCGGC TCAAGGCCCA CGTGCGGGTC AGCGACACGT TGGCCAGGCT GGGCGACGAC
GAGTTCGTGG TCATCCTGAC CGGGGCGCGG GATGAGCGGG GAGTGAGCAT CGTGGCCCAG
TCGCTTCTGG ACCTGCTCAC CCCGTCCTTT GACCTGGAAG GAAAAGAGGT GTTCATCTCC
ACCAGTATCG GCATTGCCCT GTTCCCGTCC GACGGCGAGG ACGGCAATGT GCTCCTTTCC
CGGGCCGATA TGGCTCTGCA CGCGGCCAAG GAGGCCGGCC GCAACGTCTA TCGCTTCTAC
AGCGACGACA TGAACCGCTC CGCCCAGGAC CGGCGGGGGC TTGAGGACCG TCTGCGGCGC
GCCTTGGCCA ATGAGGAGTT CTATCTCGAT TATCAGCCCC AGATCGATAT GCGGACCGGG
GGAATCTTCG GCGTTGAGGC GTTGCTGCGC TGGAACCACC CCGAGGAAGG CCTTATCCCG
CCCGGGCGCT TCATTCCCGC GGCCGAAGAG ATGGGGTTCA TCCGCCGCAT CGGCGAGTGG
GTCCTGCGGG CAGCCTGTCT CCAGTGCCGT GCCTGGCAGG AGTCGGGCCT CCCGCCGGTC
AGGGTGGCCG TCAACGTGTC GGGGCACCAG TTCAACCAAC CGGGGTTCAT CGATATGGTC
GACCGGGTTC TGGAGGAGAC AGGGCTTGAT CCCACCCTTC TGGAACTGGA GCTGACCGAA
AGCACCCTGC TCGAAGGGGC CCGGGACACG ATCATGACCC TCATCGACCT GAAGGTAAGG
GGCATTCATC TGGCCATCGA CGACTTCGGC ACCGGGTATT CGTCCCTCAG CTACCTGAAG
CACTTCCCCA TCGACCGGCT CAAGATCGAC CGCTCCTTTG TCCGCGATAT CGTCTCCGAC
CTGGACGACC GGGCCATCGT GGAGGCGATC ATCGCCATGG CCCACAGCCT GGGGCTGCGG
GTCCTGGCCG AGGGGGTCGA GCGGGAGGAG GAGCTGGAGT TGCTGCGGGA GCGGGGGTGC
GACGAGGTTC AGGGGTACTA CTTCGGCAGG CCCATGTCGG CCCGGGACCT GGAGGCGCGC
CTGATGGCGG CGTTGCCCGC CCGCGGGACC GCACCCCTGC GGCTGATAGC GAGGGCCGAA
GAGGGGTAG
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| Protein sequence | MKIRSTLTAG CFIFALLTGL VGYFGGSAIT RISAEFDAVT RDGLPAIRTL HDIRHAGVRI
VASTSEFGLV SVVGRNGVAA RHQVEEEKEL LEQGAGLYQS AFSTLKDLSD RLDPETRQYV
QEIDRAGRDL LALSAESMET VRRVSSPAAI LEVKERFETA ERHFLDVVDR ALALERRRLV
TRQQEVHDSI TLALFTLSAA SAVALLFAMG GGTLSAILIS RPIALLQEGV EQVGQGILDT
RIDISGNNEI GRLAGAFNRM TTELRAAKDE ITTARNYLDN VICSMADALL VVDTNGTVMN
VNPALCGLLG YRENELIGRS FSSILADGGH GQSIIAEMAE QGQVPDRELL YRSRQGELIP
VVLSGGAMRN QDGEVCGIVC IAHDMRERKR SEEEIRRLAY FDPLTGLPNR ALFQDRVSHA
LAVARREEGA VALLFLDLDR FKDINDTLGH AMGDLLLTSV ADRLKAHVRV SDTLARLGDD
EFVVILTGAR DERGVSIVAQ SLLDLLTPSF DLEGKEVFIS TSIGIALFPS DGEDGNVLLS
RADMALHAAK EAGRNVYRFY SDDMNRSAQD RRGLEDRLRR ALANEEFYLD YQPQIDMRTG
GIFGVEALLR WNHPEEGLIP PGRFIPAAEE MGFIRRIGEW VLRAACLQCR AWQESGLPPV
RVAVNVSGHQ FNQPGFIDMV DRVLEETGLD PTLLELELTE STLLEGARDT IMTLIDLKVR
GIHLAIDDFG TGYSSLSYLK HFPIDRLKID RSFVRDIVSD LDDRAIVEAI IAMAHSLGLR
VLAEGVEREE ELELLRERGC DEVQGYYFGR PMSARDLEAR LMAALPARGT APLRLIARAE
EG
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