Gene GSU0933 details

Gene Information

• Locus tag: GSU0933
• Symbol: upp
• ID: 2687088
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 1002836
• End bp: 1003465
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637125603
• Product: uracil phosphoribosyltransferase
• Protein accession: NP_951987
• Protein GI: 39996036
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.578526
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCGTTC ACGAGCTTAC CCACCCGTTA GTCAGGCACA AGATCGGCCT CATGCGCGAG 
GCGGATATCA GCACCAAGAA ATTTCGGGAA CTTGCCGCCG AGCTGGCGCG GTTGCTGGCC 
TACGAGGCGT GCGGCGACTT CCCCCTGGAG GTCCGGACCA TCACCGGCTG GGACGGCAAC 
CCGGTGGAGA TCGAACAGAT CAAGGGGAAG AAGGTGACGG TGGTGCCCAT CCTGCGGGCC 
GGCATCGGCA TGCTCGACGG GGTCCTCGAC ATGATCCCCA ACGCCAAGGT GAGCGTGGTG 
GGACTCGCCC GCAACGAGGA GACCCTCGAA GCACACACCT ATCTGGAGAA GTTCGTGGAC 
AAGCTTGACG AACGGCTGGC CGTCATCCTC GACCCGATGC TCGCCACGGG CGGCTCCATG 
GAGGCAACCA TCAGCATGCT CAAGCGCAAC GGTTGCCGCC AGATCAGGGT CCTGGCGCTG 
GTGGCGGCAC CCGAGGGGCT CGCCCGGGTC ACTGCCGCCC ATCCCGATGT GGACATCTAC 
GTGGCGGCCA TTGACCGCTG CCTCAACGAA CACGGCTACA TCCTCCCCGG TCTCGGCGAC 
GCGGGGGACA AGATCTTCGG CACTAAATAA 

 

Protein sequence

MGVHELTHPL VRHKIGLMRE ADISTKKFRE LAAELARLLA YEACGDFPLE VRTITGWDGN 
PVEIEQIKGK KVTVVPILRA GIGMLDGVLD MIPNAKVSVV GLARNEETLE AHTYLEKFVD 
KLDERLAVIL DPMLATGGSM EATISMLKRN GCRQIRVLAL VAAPEGLARV TAAHPDVDIY 
VAAIDRCLNE HGYILPGLGD AGDKIFGTK