| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0914 |
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| Symbol | rhlE-2 |
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| ID | 2687174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 980161 |
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| End bp | 981504 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637125584 |
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| Product | ATP-dependent RNA helicase RhlE |
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| Protein accession | NP_951968 |
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| Protein GI | 39996017 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.131359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTCA AATCGTTCGG TTTTCATCCG GCCGTGGCCA CGGGAATCGC GGCGGCCGGC
TACGAAACCC CCACACCGAT CCAGGCCCAG GCCATCCCCG CGGTCATGGC GGGGCGCGAC
GTCATGGGGT TGGCCCAGAC CGGCACCGGC AAGACAGCGG CCTTTGCCCT GCCGATCCTG
CATCGCCTGC AACAGGGCGA GCGTGGCCGC GTCCGTGCCC TGGTCATCGC CCCCACCCGC
GAGCTTGCGG AGCAGATCAA CGACAGCTTC GTCACCCTGG GGCGGCAGAC CCGCCTGCGG
AGCGTGACGG TCTACGGCGG GGTAGGGGTG AATCCCCAGG TGCAGAAGCT CAAGGCCGGC
GCCGAAGTGG TCGTGGCCTG CCCGGGTCGG CTCCTGGACC ACATCGCCCA GGGGACCATC
GACCTGTCGC GCCTGGAGGT GCTCGTCCTG GACGAGGCGG ACCAGATGTT CGACATGGGC
TTTCTGCCCG ACATCCGACG GGTGCTCAAG CATCTTCCCC CCCGGCGGCA GACGCTGCTC
TTCTCGGCCA CCATGCCCAT CGACATCCGC ACGCTGGCCC AGGATATTCT GGTGGACCCG
GTGACGGTGC AGGTGGGGAC CGTGGCCCCG GCGGTCACCG TCGCCCACGC CCTCTACCCG
GTGGAACAGC ACCTGAAGAC CCCGCTTCTG CTGGAGCTTC TTCGCCACAC GGACACTGAG
TCGGTGCTGA TTTTCACGCG CACCAAGCAC CGGGCCAAGC GCCTGGGTGA ACAGTTGGAG
AAGGCCGGCT ACCGGGCGGC CTCGCTTCAG GGGAATCTCT CCCAGAACCG GCGGCAGGCT
GCCCTTGATG GCTTCCGTGA CGGCACGTTC CAGATCCTGG TGGCCACCGA TATCGCGGCC
CGCGGCATCG ACGTGAGCCA GGTGTCCCAC GTGATCAACT ATGACATCCC CGACACGGCA
GAGGCGTACA TCCACCGTAT CGGCCGCACC GGCCGCGCGG CCCGCAGCGG AGACGCCTTC
ACCCTGGTGA CCTCTGACGA CGGAGCCATG GTTCGTGCCA TCGAACGGAG CCTCGGTGCC
CCCATCGAGC GCCGCACCGT GCAGGGCTTT GACTACTCGG TGCCGGCGCC GAAAAAGGAT
GTGGAGTTTG CCCGTCCGCC CCGTGAGCCG CGCCAGGCCC GACCCCACGC AAACCAGCCG
AAGAAAGGGG GCGCAGCGGC ATCCCCCTCG GCGTCTGGAC GGCCGTCCCA TCCCAAGGAC
TCGGGCCGGC GGCAGCCGGG CCAAGGAGCT CCCGCGTCGG GTCCGTCGCG GCAACGGCCC
GGAAGCCCCC GGCGGCCCCG CTGA
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| Protein sequence | MDFKSFGFHP AVATGIAAAG YETPTPIQAQ AIPAVMAGRD VMGLAQTGTG KTAAFALPIL
HRLQQGERGR VRALVIAPTR ELAEQINDSF VTLGRQTRLR SVTVYGGVGV NPQVQKLKAG
AEVVVACPGR LLDHIAQGTI DLSRLEVLVL DEADQMFDMG FLPDIRRVLK HLPPRRQTLL
FSATMPIDIR TLAQDILVDP VTVQVGTVAP AVTVAHALYP VEQHLKTPLL LELLRHTDTE
SVLIFTRTKH RAKRLGEQLE KAGYRAASLQ GNLSQNRRQA ALDGFRDGTF QILVATDIAA
RGIDVSQVSH VINYDIPDTA EAYIHRIGRT GRAARSGDAF TLVTSDDGAM VRAIERSLGA
PIERRTVQGF DYSVPAPKKD VEFARPPREP RQARPHANQP KKGGAAASPS ASGRPSHPKD
SGRRQPGQGA PASGPSRQRP GSPRRPR
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