Gene GSU0898 details

Gene Information

• Locus tag: GSU0898
• Symbol: recQ
• ID: 2687381
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 963031
• End bp: 964842
• Gene Length: 1812 bp
• Protein Length: 603 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637125570
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: NP_951954
• Protein GI: 39996003
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.109686
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGGCACG AAACCCTCGC CGTCCTCCGC ACGGTCTTCG GGTACCGGTC CTTCCGCCCG 
TTCCAGGAGG AGATCGTTGA CCGGGTGGCG CGCGGGGGCG ATACGTTCGT CCTGATGCCC 
ACCGGCGGCG GCAAGTCCCT CTGTTACCAG ATACCCTCCC TGGTACGGCC CGGCGTGGGG 
ATCGTGATTT CCCCCCTCAT TTCCCTCATG AAGGACCAGG TGGATGCCCT GCGCGAGAAC 
GGCGTGGCAG CGGCCTGCTA CAACTCGACC CTGGGCGAGC GGGAGTCGCG CCGGGTGCTC 
GCCCGGCTCC ACGGCGGCGA GCTGGACCTT CTCTACGTGG CCCCGGAACG GCTCATGACC 
GATGCCTTTC TGGAGCGGCT ACGGGAGATA CCCATCGCGC TCTTCGCCAT TGATGAGGCC 
CACTGCGTCT CCCAGTGGGG GCACGATTTC CGTCCTGAGT ACGTGGAGCT GGGACGGTTG 
CGGGGGCTGT TCCCGACCGT GCCGATGATC GCCCTGACCG CCACCGCCGA CGCCCAGACC 
CGAGGCGACA TCGTGACGCG GCTGGGGCTT CGGGACGCCG AGATGTTCGT GACCGGCTTC 
GACCGGCCCA ATATCCGCTA CAGCGTTCTG GAAAAGCAGA AGCCGTTCCG ACAACTGGAG 
GAGTTCCTGG CGACGCGCCC CCGGGAGGCG GGCATTGTCT ACTGCCTTTC CCGCAAGCGG 
GTGGAAGAAG TGGCGGAGAA GCTCCGGGCG GCCGGGGTGG AGGCGGGGGC CTATCACGCC 
GGGCTTGCCG ACGCGGAACG GAGCCGGGTC CAGGAGGCGT TCCTGCGGGA CGACATCCGG 
GTGGTGGTGG CCACGGTGGC CTTCGGCATG GGGATCGACA AGCCCAACGT CCGGTTTGTA 
GTCCACTACG ACCTGCCCAA GAACATCGAG AGTTACTACC AGGAAACCGG GCGGGCCGGC 
CGCGACGGTC TCCCGGCCGA GGCGCTGCTC CTCTTCGGCT ACGGCGACAT CCCGGTCTCC 
CGCTCCCTCA TCGAGTCGGG CGGGAACCCC GAGCAGGTGC GGATCGAGCT GCACAAGCTG 
AACGCGATGG TGGGGTTCGC CGAGGCACTC GTCTGCCGGC GCCGGGCACT GCTCGGCTAC 
TTCGGCGAGC GGCTGGAGGA ACCTTGTGGC AACTGCGACC TCTGTCTGGC TCCGCCCGAA 
ACCTTCGATG CCACCGAAGA GGCCCGCAAG GCCCTTTCCT GCGTCTACCG GGTGGGGCAG 
CGCTTCGGCG TGGGGCACGT GATCGATGTC CTGCGCGGTT CGCGGAGTGA ACGCATCCTG 
GCCCTGGGCC ACGACCGGCT CTCGACCTAC GGCATCGGCG CCAGCCTGGC GGCCGAGGCC 
TGGGGGAGCA TCATCCGCCA GCTCATCCAC CGGGGATACC TGGAGCAGGA CCTGGCCAAC 
TACTCGGTGC TGAAGCTGAC CCCTGCGGCC CGGCCGCTGC TGCGGGGCGA GGAGAGCCTG 
GTCCTGGCGA AGCCGCGGCT GCGGATGGCC GCTCCGAAAA AGGAAAAGGC CCCCCGCCGG 
CCGGGAGCCG CCACGCCGGC GGAGCGGGAC GAGGAGCTCT TCCAGGAGCT GCGGGCGCTC 
CGCAAACGGT TGGCGGATGA CCAGCAGGTT CCTCCGTATA TCATCTTCAG CGATGCGACC 
CTGGCCGAGA TGGCGTCGCT GCGGCCGACC ACGCCGGAAG AACTTTTGCG GGTGAACGGG 
GTGGGCGAGC GGAAGCTCGG CCGCTACGGC GCCCCGTTCC TGGAGGCGAT CCGGAGCCAT 
GGCGCCGGTT GA 

 

Protein sequence

MGHETLAVLR TVFGYRSFRP FQEEIVDRVA RGGDTFVLMP TGGGKSLCYQ IPSLVRPGVG 
IVISPLISLM KDQVDALREN GVAAACYNST LGERESRRVL ARLHGGELDL LYVAPERLMT 
DAFLERLREI PIALFAIDEA HCVSQWGHDF RPEYVELGRL RGLFPTVPMI ALTATADAQT 
RGDIVTRLGL RDAEMFVTGF DRPNIRYSVL EKQKPFRQLE EFLATRPREA GIVYCLSRKR 
VEEVAEKLRA AGVEAGAYHA GLADAERSRV QEAFLRDDIR VVVATVAFGM GIDKPNVRFV 
VHYDLPKNIE SYYQETGRAG RDGLPAEALL LFGYGDIPVS RSLIESGGNP EQVRIELHKL 
NAMVGFAEAL VCRRRALLGY FGERLEEPCG NCDLCLAPPE TFDATEEARK ALSCVYRVGQ 
RFGVGHVIDV LRGSRSERIL ALGHDRLSTY GIGASLAAEA WGSIIRQLIH RGYLEQDLAN 
YSVLKLTPAA RPLLRGEESL VLAKPRLRMA APKKEKAPRR PGAATPAERD EELFQELRAL 
RKRLADDQQV PPYIIFSDAT LAEMASLRPT TPEELLRVNG VGERKLGRYG APFLEAIRSH 
GAG