| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0895 |
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| Symbol | |
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| ID | 2685442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 957967 |
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| End bp | 960033 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637125567 |
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| Product | GAF domain/GGDEF domain-containing protein |
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| Protein accession | NP_951951 |
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| Protein GI | 39996000 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0310961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCCATG TGAACCTGAC GACAATTCAG CCGGTGGAAC TGCTTGAGGC CCTCAAGTCA
CACCAGTTCC TCGCGCCCTA CCACCTGACT TTCTGCTGCG ATCAGGACGG AGGGATGCCG
CGCTACAAGT CCAGGTTCAC GGTCTGCGGC TCGCCGCACC AGTATCACTT CTGCACGCAT
TCCTGCATGC TGGCCTTGGA AGACGCGGTC GGACGCGCGG TCGCCGGCAA CCGCCCGGTG
GTGTTCCAGT GCAGCGTCGG CCTCCTCAAC TTCGCCGTCC CTCTCCGGGC CGGCGACATC
CCCTTCACCT GCCTGATCGG CGGCGGAGTC CGCGACAAGA GCATTGACCT CGCCCGCATG
GAATCGCTTG CCGCCGCCGA CGGCATGGAC GCCTTCGCCC TGCTGGCCGA GATCGAGGAA
CTGCCGGTCG CCACCGTCGA AGAAGTCGAG GAGGTGGCGC GCAAGGTGCA GGAACTGGTC
CCCTCCCTGC TGGCCCGCAA CCTCCACAGC CAGATATTCG AGAAGACCAT GCAGCGGCTC
ACCGCCATCT CCGGCATCTC CACCGGCATC GACACGGCGG AATCCGTCTG CGATCTCATG
ACCCTCATCA GCGAGACCCT CGGCGTCCTC TTCGACATCT CCAAGATCGC CGTGCTCATC
CCCCAGAACG GCCCCACCTC GCCCTACACC GTCAAGGGGA TATGGGGACT GCAGCGGGAT
CTCGGCACGA TTTCCGGACC CAAGGCGCTG GGCATGTTCC CCAGGGACCG GGCGGGCAGC
GTCGTTCTGC AGGAAGATGA ATGCCGCTCG ATCTTCCCGG ACCTGGAGGT GAGCCACGCC
ACTTGCCTCC GCCTCACCTC TGGCCAGGCC GTCCACGGAA TTCTAGTCCT CTTCGATGCC
AGCATCCCGC CCCGGGAAGA GCTGCTGGTC TCCCTGGTGA CCGGCAAGGC GGCGACACAG
CTCGCGCGGA TGCGGGAAAA GGATAAATAC ACCTCCGAGA TCGCCCAGGC CCGGGAGCTC
CTCACCATGT TCAGCGCCCT GTCGCGGACC GAGAGCAAGG ATCAGCTCAA CGAGCAGATC
CTCGGCATGG CCGCCGACCT GGTGGACGCC ACCTGCGGCT CGCTCATGTT CATCGACGAA
AGCGGCTCCC AGCTCAAGAT CGAATCGGCC CTCGGCATGA ATCTTCACCT GGCCCAGAGC
ATGGTGGTCC AGGTGGGGAC CGGCATTGCC GGCAAGGTGG CCGCCAGCGG CAACCCGCTG
TTGGTGAACG ACATCGAGAA GGACCGCCGG GTCGGCACCC CCAACCGCCC CCGCTTCAAG
ACCAAGTCGT TCGTGAGCAT TCCCATAAAA CTCCGGGAAG ATACCATCGG CGTGCTCAAC
CTCTCGGACA AAAAGAACCA GGGGATCTTC ACCGACGCCG ACCTCAAAAT ATTGATCACC
TTCACGGATC ACGCCTCCAT CATGATCGAA CGCGCCCTCT CCATCGAGCG GGCCGACATC
CTGGAGCAGC TCTCCATCAC CGACCACCTG ACCGGCCTCT ACAATCGCCG CTTCCTCAAG
CGGCGCATGG AGGAAGAGCT GGCCCGCAGC ATCCGTCACA ACCTGAACCT GACCGTGATG
CTCATCGATC TGGACCACTT CAAGATCTAC AATGACCTCT GCGGCCACCT GGCCGGCGAC
CGGGCGCTCA AGAGAACGGC CAAGATCCTC AGCGAAACCG CCCGACAGAT GGACGTGGTC
ACCCGCTTCG GCGGCGAAGA GTTCTGCATC ATCCTGCCGG GAACATCCAA GAAGGAGTCC
ATCTTCGTGG CCGAACGGAT CCGGCGCGAG ATCGAAGGAG AGGATTTCCC CCACGAGGAT
AATCTTCCCT TGGGCCGGCT CACCGCCAGC ATCGGCATCG CCTCGTTCCC CGAGGACGGC
AGCACCGAGG CGTCGCTCGT CAAGGCGGCC GACGTGGCCC TCTACCGGGC CAAGTCCGAC
GGGCGGAACC GGGTAATCAT CGCAGGGAAT TCAGTTGACG ACCACGAGCA GATCTCCCGC
TTCAAAACGG CGCTCAACCT GCCATGA
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| Protein sequence | MPHVNLTTIQ PVELLEALKS HQFLAPYHLT FCCDQDGGMP RYKSRFTVCG SPHQYHFCTH
SCMLALEDAV GRAVAGNRPV VFQCSVGLLN FAVPLRAGDI PFTCLIGGGV RDKSIDLARM
ESLAAADGMD AFALLAEIEE LPVATVEEVE EVARKVQELV PSLLARNLHS QIFEKTMQRL
TAISGISTGI DTAESVCDLM TLISETLGVL FDISKIAVLI PQNGPTSPYT VKGIWGLQRD
LGTISGPKAL GMFPRDRAGS VVLQEDECRS IFPDLEVSHA TCLRLTSGQA VHGILVLFDA
SIPPREELLV SLVTGKAATQ LARMREKDKY TSEIAQAREL LTMFSALSRT ESKDQLNEQI
LGMAADLVDA TCGSLMFIDE SGSQLKIESA LGMNLHLAQS MVVQVGTGIA GKVAASGNPL
LVNDIEKDRR VGTPNRPRFK TKSFVSIPIK LREDTIGVLN LSDKKNQGIF TDADLKILIT
FTDHASIMIE RALSIERADI LEQLSITDHL TGLYNRRFLK RRMEEELARS IRHNLNLTVM
LIDLDHFKIY NDLCGHLAGD RALKRTAKIL SETARQMDVV TRFGGEEFCI ILPGTSKKES
IFVAERIRRE IEGEDFPHED NLPLGRLTAS IGIASFPEDG STEASLVKAA DVALYRAKSD
GRNRVIIAGN SVDDHEQISR FKTALNLP
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