Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0854 |
Symbol | |
ID | 2685320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 913520 |
End bp | 914611 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637125527 |
Product | membrane protein |
Protein accession | NP_951911 |
Protein GI | 39995960 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0563046 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACCGGG GACACTTTTT CGCGCTGCTC GGTTTTCTGG CCGTTGCCCT CATGCTGTAC CTCGTCTATG CCATTGTGGC GCCGTTCCTG GCGCCGCTGG GATGGGCCGC CGTCATCGGC GTGCTCACCT TTCCCCTCTA CCGGAAGCTC CGGGCCGGGG TCGGCGGCAG GGAGTTGCTT GCCGCGGGAA TAATGACCCC CGCAGTGGTC ATCACCCTCG TGGTCCCCGT GGTCGGCCTC ACGTTCTTCA TCATCCAGGA AGCGACCCTC GCCTACCAGT TCCTGGAACG GGTCGCCGCC GACGGAGGAG AGGCGGTGCT GGCCAAGATT CGGGCCCACC ACCTGATACA CCCCTGGATT ACGCGGATCG AGGCTTACAC CGGCCCCCTC AGCCTTGAGA TCGACACCAC CTTTCTCCCC GAGGTGAAAG AGGTGGCGGC CAAGATCCTC GGTTACTCCA AGGAGGCGGT CAAGAACGCC TTCCTCTTTA TCCTCAAGAT TATCCTGATG GTGATTGCCC TGTTCTTCAT CTATCTCGAC GGCGAACGGG TCCAGCGCCG GGTTCTCGCG ATCATTCCCC TCACCGAGCA GCACAAGATC GAACTTTCCG ATACCGTTCG GCGGGTGCTC ACAGCGGTCA TGTTCGGCGT TTTTCTCACC TGCCTCGTGC AGGGCGCCCT CGGTGGCATC GGCCTGTTGG TTGCCGGTAT CCCCTCGCCG GTCCTCTTCG GAGCCATAAT GGCAGTCTGC GCCCTGATCC CGGTGGTGGG AACGGCCCTC ATCTGGTTGC CTGCCGCTAT CTACCTGCTG CTTAACGGGC AAATAGTCCA GGGGGTCGGG CTCATGATCT GGGGATTTGC CGTGGTTAGC TCCATCGACA ACGTGATCCG TCCCTTTTTC ATCAGCGGCA AGGCCAAGCT GCCGGTGCTC GTCATCGCCA TTGGCGGCCT GGGAGGTCTT GCCTCCTTCG GGCTGCTGGG GGCCGTGATC GGTCCCCTCG TGCTTGCCTT GTTCCTGGCA CTCTTCGATA TGTATCAGGA GGAAATGGCG GGACGCGACG ATGACGCCGG GCCCCGCCCG GGGGAGGGTT AG
|
Protein sequence | MDRGHFFALL GFLAVALMLY LVYAIVAPFL APLGWAAVIG VLTFPLYRKL RAGVGGRELL AAGIMTPAVV ITLVVPVVGL TFFIIQEATL AYQFLERVAA DGGEAVLAKI RAHHLIHPWI TRIEAYTGPL SLEIDTTFLP EVKEVAAKIL GYSKEAVKNA FLFILKIILM VIALFFIYLD GERVQRRVLA IIPLTEQHKI ELSDTVRRVL TAVMFGVFLT CLVQGALGGI GLLVAGIPSP VLFGAIMAVC ALIPVVGTAL IWLPAAIYLL LNGQIVQGVG LMIWGFAVVS SIDNVIRPFF ISGKAKLPVL VIAIGGLGGL ASFGLLGAVI GPLVLALFLA LFDMYQEEMA GRDDDAGPRP GEG
|
| |