| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0812 |
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| Symbol | |
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| ID | 2685204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 870871 |
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| End bp | 873117 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637125484 |
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| Product | nitrogen regulation protein NtrY, putative |
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| Protein accession | NP_951869 |
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| Protein GI | 39995918 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.439119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAAC GGACCACGGA CAGCACGCCT ACAGCAACAC CAGCCGAACG GGAACGGATC
AAGCGGCGCC GCGAAGGGAT CGTCATCGCC CTGTCGGTGC TCCTGATCCT GATCCTGACC
CGGGTGGAGA TCCACCTGTC GCGCATCAGC TCCGATGTGC CGATGGGGAG CAACTTCCTG
ATCTTCGGCG TCATCAACGT CATCATCCTG CTGATCATCC TCCTCATCTA CCTTCTGTTC
CGCAACGTGG CAAAGCTTCT GATGGAGCGA CGGGGCAAGG CCCTGGGGGC CAACCTGCGC
ACGAAACTCG TCATCGCCTT CGTGAGCCTC TCCATCATCC CCACCATGCT CCTGTTCTTT
GTCTCGGCCA CCTACGTGAA CCAGAGCATC CGCAACTGGT TCAACACCCA GATCGAAAAC
TCCCTCTCCG AATCGCTGGA GGTTGCCCAG ACCTACTACA AGAATTCGGC GGCCAACGCT
CTCTACTACG GTAACCAGAT CAGCGCCATC ATCCGGGACC AGCGCCTGCT CAACGACGAG
AACCTGCCGC GGATGAAGGA GCTGATCCGC CAGAAGCAGA AGGAGTACAA CCTGGGAATC
GTGGAGGTCT ACTCGGCCCA GAATGAGGAG CTGGTCCGCG CCGCGAACCC GGGGCTCCCG
CTGGGGGAGT TCACCAACCC TTCCTCCGAA GACATCAAGC AGGGGCTCAA CGGCAAGGAA
CTGACCCGGG TCAACACGGT GGGTAAGGCC GACCTCATCC GCGGCATCGT GCCGATCTAT
TCCACCTACC GCGCCGACGA GGTGGTGGGG GCGGTGGTGG TCAACTACTT CGTCCCCTAC
TCCCTGGTGG AGAAAATGCG GGAGATCACC GCCTCCTACG AGCAGTTCCG TCAGCTCAAA
ATCCTGAAGA ATCCCATCCG GTCCGGCTAC ATCCTGGCCC TGTTCCTGAT CACCATGGTG
ATTATCTTCC TGGCGGTCTG GTTCGGACTC CACCTGGCCA ACAGCCTCAC CACGCCGATC
CAGGAACTGG CCGAAGCGAC CCGTCAGGTG GCCGAGGGAA ACCTGAACAT CCGCCTGGGC
CAGCGGACCG ACGATGAGCT GGGCATGCTG GTGGCCGCCT TCAACAAGAT GACCGACGAC
CTGCGAAGCA ACCAGCTGGC CCTGAAAAAC GCCAACGACG AGTTGTCGCG CAGCAACCAG
GAACTGGAAC AGCGGCGGCG CCATATGGAA ATTGTGCTCC GCAACGTGGC TGCCGGGGTC
ATCGCCGTGG ACCGGGGGGG GACGATAACC ACCATCAACC CCTCAGCGGC CCGGCTCCTG
CAGATCGACA TGCCCCGGGC CGTGGGCCAC AACTTCCGGG AGGTGCTCAA GGGAGAGCAG
CTCGACATCG TGAAGGGGGT CCTGCGGGAC ATGGTCATGG CCAAGAAGGA CAGCATCAGC
CGCCAGATCA CGGTGCCGGT GCGGGACAGC CGGGCGACGT TCCTCTTCAA CCTGTCGGTC
CTGCGGGACG AGAGCGGCGA ATTCCTCGGC ACCGTGGTGG TCTTCGACGA CATGACCCAG
TTGATCAAGG CCCAGCGGAT GGCCGCCTGG CGCGAGGTGG CCCGCCGCAT CGCCCACGAG
ATCAAGAATC CGCTGACCCC GATCCAGCTC TCGGCCCAAC GGCTGCGCAA GCGCTACCTT
CCCCGCTTCG GCGACGAAGA CCGGGTCTTT GACGAGTGCA CGGCCATGAT CGTCAAATCC
GTTGACGAAC TGAAGACCCT GGTGGACGAG TTCTCCAACT TCGCCCGGAT GCCTGCGGCC
CATCCCTCCC CCAACGACCT GAACGCCGTC ATCCGCGAGG CAGTCACCCT CTTCCGGGAA
GGGCACCGCG GCGTCGCGTT CGGCTTCAGC GCCGACGACC GGCTGCCCCT GCTGCAGCTG
GACCGGGACC AGATCAAGCG GGTCTTCATC AACCTCCTGG ACAACGCCGT GGCGGCCATG
GGGGGGACGG GCGAGGTCCG GATCATGAGC CGCTTCGATC CGGAGCTGAA AATGGCGGTG
GTGACCGTGG CCGATACGGG GCCGGGCATC CCCCCGGAGG ACAAGACGCG GGTCTTCGAG
CCCTACTTCT CCACCAAGGC GTCGGGCACC GGCCTGGGGC TCGCCATCGT CAGCAGCATC
ATCACCGACC ATCACGGGTT CATCCGGGTG CGGGACAACG AGCCCCGGGG GACCAAGTTC
GTCATCGAAC TGCCCGTGAC GGGATAG
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| Protein sequence | MDKRTTDSTP TATPAERERI KRRREGIVIA LSVLLILILT RVEIHLSRIS SDVPMGSNFL
IFGVINVIIL LIILLIYLLF RNVAKLLMER RGKALGANLR TKLVIAFVSL SIIPTMLLFF
VSATYVNQSI RNWFNTQIEN SLSESLEVAQ TYYKNSAANA LYYGNQISAI IRDQRLLNDE
NLPRMKELIR QKQKEYNLGI VEVYSAQNEE LVRAANPGLP LGEFTNPSSE DIKQGLNGKE
LTRVNTVGKA DLIRGIVPIY STYRADEVVG AVVVNYFVPY SLVEKMREIT ASYEQFRQLK
ILKNPIRSGY ILALFLITMV IIFLAVWFGL HLANSLTTPI QELAEATRQV AEGNLNIRLG
QRTDDELGML VAAFNKMTDD LRSNQLALKN ANDELSRSNQ ELEQRRRHME IVLRNVAAGV
IAVDRGGTIT TINPSAARLL QIDMPRAVGH NFREVLKGEQ LDIVKGVLRD MVMAKKDSIS
RQITVPVRDS RATFLFNLSV LRDESGEFLG TVVVFDDMTQ LIKAQRMAAW REVARRIAHE
IKNPLTPIQL SAQRLRKRYL PRFGDEDRVF DECTAMIVKS VDELKTLVDE FSNFARMPAA
HPSPNDLNAV IREAVTLFRE GHRGVAFGFS ADDRLPLLQL DRDQIKRVFI NLLDNAVAAM
GGTGEVRIMS RFDPELKMAV VTVADTGPGI PPEDKTRVFE PYFSTKASGT GLGLAIVSSI
ITDHHGFIRV RDNEPRGTKF VIELPVTG
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