Gene GSU0700 details

Gene Information

• Locus tag: GSU0700
• ID: 2687437
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 741330
• End bp: 743243
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637125372
• Product: sensory box/response regulator
• Protein accession: NP_951757
• Protein GI: 39995806
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2208] Serine phosphatase RsbU, regulator of sigma subunit
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCATTC CACTCCGCGT TCTGATCATC GAAGACTCCG AAGACGACAT GCTGTTGGTG 
CTGCGGGAAC TCCGCAAGGG GGGATACGAG CCTGATCATG TGCGGGTGGA GACCGCCGCC 
GAGATGGTTG CGGCCATGGC GGCGCGGGAC TGGGATCTGG CCCTCTCGGA CTACGTCCTC 
CCCCGCTTCA GCGGCATGGA CGCGCTGCGG CTCTGGCGGG AGCGGGAGGA GGATCTGCCG 
TTCATCGTGG TGTCGGGCAA AATCGGCGAG GAAACGGCGG TGGCCGCCAT GAAGGCGGGC 
GCCAACGACT ACCTCATCAA GGGAAGCACC TCCCGGCTGG TGCCTGCCAT CGCCCGCGAA 
CTGCAGGAGG CGGAAGTGCG CCGCAAGCGC CGGGAGGCCG AACAGGCCCT GGCCCGGAGC 
GAGGAACGGT ACCGGCGGCT GGTGGCCGCC GTGTCCAACT ACACCTACAC CGTGGAATTG 
GCGGAAGGGC ACGTGATCCG CACCTCCCAC GGCCAGGGGT GCCTGCCCGT GACCGGCTAC 
ACGAGCGACG AATACAATAC CCGCCCCACC CTCTGGTACG AGATGATCCA CGGCGAAGAC 
CGGGACCGGG TGCTGGCCAG CATCGCCCGG CTGGAGGCAA AGAAGGGGGT GGTGACCCTC 
GAGCACCGGA TCGTCCGCAA GGACGGTGAA ACCCGCTGGG TGCGCAATAC CATCGTCCCA 
ACCTGGGACG ACACGGGCCG GCTCACGGCC TACGACGGAC TCATCGCCGA CATCACCGAG 
CGCAAGGAAG GAGAACTGAC CCGCCAGATT CAGACCGTGG CCCTGAAGGC GGCGGCCAAC 
GCCATCGTCA TCTGCGCCCC GGAGGGGAGG ATAATCTGGG CCAACCCCGC CTTCACCCGC 
CTGACCGGCT ACCTGCTGGA CGAGGTGGCG GGCCGCGGCA TCGGTATCCT CAACTCCGGC 
GTGCACGGTA AGGAGTTCTA CCGCAATCTG TGGCACACCA TTCGCTCGGG TACGGTCTGG 
CACGGCGAGA TGATCAACCG GCGCCGGGAC GGCTCCCTCT ACCCGGAAGA GCAGACCATC 
ACGCCGGTGC GGGACGAACG CGGGGCCATC CGCTGCTTCA TTGCCATCAA GCAGGACATT 
GCCGAGCGGA AACAGGCCCA GGAAGCGCTG TTGGAGAATG CCCGGCTCGC CTGCGACATG 
CAGCTGGCCC GCCAGATCCA GCGATCGCTG CTGCCGGAGA CGCCTCCGCC CGTGCCGGGT 
TGCCGGTGCG CGGGGCGCTG GGTGCCGGCC GCCCACGTGG GGGGCGATTA CTACGATTTC 
TTCCCCCGGG AGGACGGCTC ACTCGACCTG GTCATCGCTG ACGTGTCCGG CCACAGCGTC 
GGCGCGGCTC TTATCATGAC CGAACTGCGG AGCGTCATCC GCTCCCTGGT CCACGCGGGG 
GGAACACCCG CTCAGATCGT CGGTTCGCTC AATGCACTGC TCCATGAAGA CCTGTCCCGG 
GCGGAGCTCA TCATAACCCT CTTCTATGCC TCCTACTCCC CCGCCACCCA CACTCTGGCC 
TTTGCCAGCG CCGGACACAG CCCTCCCCTG GTCTGCCGCC GCCGGGGGGA ATGCCGCCAG 
ATTGACGCGG AGGGGCTGAT CCTCGGCGTC AATCCCCTCG TGGAGTATGA GCAGAACGAA 
GTCACCATGG CCGCCGGAGA CATCCTTCTG CTCTACACCG ACGGCATCAC CGAGGCGACC 
GGCGCGGACG GGGAATTCTT CGGCACGGCC AGGCTCGCCC GGGCCATGGA GGAGGAAAGC 
GGACGCGAAC CGGAAGAACT CCTCGACGCC ATTCTGACAC GACTGCGGAT GTTCACGGGG 
GGAGTGCCGT CCGGCGACGA CATCTGTATG GCGCTGCTGA AGGTGGGGGA TTAG 

 

Protein sequence

MGIPLRVLII EDSEDDMLLV LRELRKGGYE PDHVRVETAA EMVAAMAARD WDLALSDYVL 
PRFSGMDALR LWREREEDLP FIVVSGKIGE ETAVAAMKAG ANDYLIKGST SRLVPAIARE 
LQEAEVRRKR REAEQALARS EERYRRLVAA VSNYTYTVEL AEGHVIRTSH GQGCLPVTGY 
TSDEYNTRPT LWYEMIHGED RDRVLASIAR LEAKKGVVTL EHRIVRKDGE TRWVRNTIVP 
TWDDTGRLTA YDGLIADITE RKEGELTRQI QTVALKAAAN AIVICAPEGR IIWANPAFTR 
LTGYLLDEVA GRGIGILNSG VHGKEFYRNL WHTIRSGTVW HGEMINRRRD GSLYPEEQTI 
TPVRDERGAI RCFIAIKQDI AERKQAQEAL LENARLACDM QLARQIQRSL LPETPPPVPG 
CRCAGRWVPA AHVGGDYYDF FPREDGSLDL VIADVSGHSV GAALIMTELR SVIRSLVHAG 
GTPAQIVGSL NALLHEDLSR AELIITLFYA SYSPATHTLA FASAGHSPPL VCRRRGECRQ 
IDAEGLILGV NPLVEYEQNE VTMAAGDILL LYTDGITEAT GADGEFFGTA RLARAMEEES 
GREPEELLDA ILTRLRMFTG GVPSGDDICM ALLKVGD