Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0694 |
Symbol | |
ID | 2687057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 734456 |
End bp | 735100 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637125366 |
Product | HAD family hydrolase |
Protein accession | NP_951751 |
Protein GI | 39995800 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGACG AACGGCGTCC GGACCCGGTC GTGCCTGACC TGCTGGCGCG CCCTTACTGG ATCTTCGACA TGGATGGAAC CCTGACCGAG CCGGTTCACG ACTTCGCCGC CATACGCGCC GCCCTGGGGG TGCCGGCGGG GTGCGACATC CTCGGCCATC TGGACACTCT CCCCGAAGGG GAGTCGCGGC GTCTACACGG ACTTCTGGAC GAAATCGAGA TCGAACTGGC GGGCCGGGCC GAGGCGTCCG CCGGAGCCCG GCGCCTGGTG CAGGCCCTGG ACCGGCGCGG AGTACGCATG GGGATCGTGA CCCGCAACAC GAGACAGGTG GCGCTGCGGG TGCTGGAACA TATCGGCGTG GGGAGCTACT TCCCGGCCGG GAGCATTCTG GGGCGTCACG ACGCACTCCC CAAGCCGGAG CCGGACGGCA TCCTCCGCCT GGCGGCATCC TGGGGGACAA CCGGACGGTC TGCGGTAATG GTGGGGGACT ACCTCTTCGA CCTCCAGTGC GGCCGGTCGG CAGGGGCGCT CACGGTACAC GTGGACCGGA CCCGAGCCTT CCGCTGGCCC CAGTTCACCG ATCTGGCGGT GGCAAGCCTG GAAGAGCTGG CTGAACTGGT GGAACGGGGA ATCAGCCGAG AGTGA
|
Protein sequence | MTDERRPDPV VPDLLARPYW IFDMDGTLTE PVHDFAAIRA ALGVPAGCDI LGHLDTLPEG ESRRLHGLLD EIEIELAGRA EASAGARRLV QALDRRGVRM GIVTRNTRQV ALRVLEHIGV GSYFPAGSIL GRHDALPKPE PDGILRLAAS WGTTGRSAVM VGDYLFDLQC GRSAGALTVH VDRTRAFRWP QFTDLAVASL EELAELVERG ISRE
|
| |