Gene GSU0662 details

Gene Information

• Locus tag: GSU0662
• Symbol: rplY
• ID: 2685482
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 698985
• End bp: 699569
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637125334
• Product: 50S ribosomal protein L25/general stress protein Ctc
• Protein accession: NP_951719
• Protein GI: 39995768
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1825] Ribosomal protein L25 (general stress protein Ctc)
• TIGRFAM ID: [TIGR00731] ribosomal protein L25, Ctc-form

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACAGA AAACGATGAG CATAGAACTG AGGGAGAAGA ACGGCAAGGG CGTTGCCCGT 
AAGCTCAGGG CTCAAGATGT TGTGCCCGGC GTGGTTTACG GCAAGGGGAT CGAGCCGGTT 
TCCGTCAAGG TCGCTGCCAA GGATCTCGCC GCAACCATCG CCGGCGAGGG GGGGCTCAAC 
AGCCTCATCA CCCTGTCGGG TGGCGGCAGC CTCAACGGCA ATATCGTCAT CGTTGCCGAT 
ATGCAGCGCA ACCCCCTCAA GGGTGACATC CTGCACGTGG ATTTCCACCG GATTTCGCTC 
GACGAGAAGG TAAAGGTTCA CGTGCCTCTG GTTATGGTCG GAACCGCCGC CGGCGTCAAG 
GAAGGCGGGA TGCTCGACGT GGTTACCTAC TCCCTCGATG TTGAGTGCCT TCCGACGGCG 
ATTCCCGAGG CCATCAACGT CGACGTTACC AATCTTGCCA TCGGCCATTC CATTCACGTG 
AGCGAGCTTG TTCTGCCTGC CGGGATCAAA GTGCTCAATG ACCCCGAGAC TCCCATCGTG 
AGCATCCACG GAAAGGCAAA GGAAGAAGCT CCTGCGGCGG AATAA 

 

Protein sequence

MEQKTMSIEL REKNGKGVAR KLRAQDVVPG VVYGKGIEPV SVKVAAKDLA ATIAGEGGLN 
SLITLSGGGS LNGNIVIVAD MQRNPLKGDI LHVDFHRISL DEKVKVHVPL VMVGTAAGVK 
EGGMLDVVTY SLDVECLPTA IPEAINVDVT NLAIGHSIHV SELVLPAGIK VLNDPETPIV 
SIHGKAKEEA PAAE