Gene GSU0645 details

Gene Information

• Locus tag: GSU0645
• Symbol: rimM
• ID: 2687183
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 678444
• End bp: 678962
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637125311
• Product: 16S rRNA processing protein RimM
• Protein accession: NP_951702
• Protein GI: 39995751
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0229573
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGGCAGG ATGATCTCAA GCTGCTCGGC AAGATAGTAA CAACTCACGG GATTCGGGGG 
CAACTCAAGG TCGCTTCCTT TTCCGGTGAA TTTGATACGA TCCTTTCCCT TGAGACGGTC 
GTGCTCAAGG GAAAGGACGG CAGGATGGAG ACATTCCCCG TGGCACGGGC GACCGTGCAT 
CATGACCGGG TGCTCCTTTC GCTTACGCCG TTTACGAATA TAAACGAAGT ACTTCATCTG 
ATTTCGGCTG TGAGCTACGC CCATCGCGAT CAGTTTCCCC CCTTGGAAGA GGGGGAGTAT 
TACTGGTGCG ACCTCATAGG TCTCCAGGTT GTGACAGCGG CGGGAACCGT CATCGGCCGG 
CTCGACTCGA TACTCCCCAC GGAAAGTCAT GATGTCTACG TGGTACGCGG TGCCGACAGG 
GAATATCTCA TCCCGGCCGT AGAGGATGTG GTGGTGCAGG TCGACCTTGA GGCAGGCACC 
ATGACGGTCA GTCCCCCCGA GGGGCTGCTC GATCTATGA 

 

Protein sequence

MRQDDLKLLG KIVTTHGIRG QLKVASFSGE FDTILSLETV VLKGKDGRME TFPVARATVH 
HDRVLLSLTP FTNINEVLHL ISAVSYAHRD QFPPLEEGEY YWCDLIGLQV VTAAGTVIGR 
LDSILPTESH DVYVVRGADR EYLIPAVEDV VVQVDLEAGT MTVSPPEGLL DL