Gene GSU0626 details

Gene Information

• Locus tag: GSU0626
• Symbol: gmd
• ID: 2685242
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 663160
• End bp: 664209
• Gene Length: 1050 bp
• Protein Length: 349 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637125293
• Product: GDP-mannose 4,6-dehydratase
• Protein accession: NP_951684
• Protein GI: 39995733
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1089] GDP-D-mannose dehydratase
• TIGRFAM ID: [TIGR01472] GDP-mannose 4,6-dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAACGCG CACTCATAAC CGGCATTTCT GGCCAGGACG GCTCGTACCT GGCGGAACTG 
CTCCTTGGCA AGGGATACGA GGTTCACGGC GTCATCCGGC GTTCGTCATC ATTCAATACC 
GGGCGGATCG ACCACCTCTA TCGGGACCCC CACGAGCCCG ACGTGCGGCT TTTCCTCCAC 
TACGGCGACT TGAACGACGC CAGCTCCATC AACCGGGTCC TGCGCGAGGT GCGGCCCGAC 
GAGATCTACA ACCTGGGCGC CCAGAGCCAT GTCCGGGTTT CATTCGATGT CCCCGAGTAC 
ACCGGGGAAA TCGATGCCCT CGGCACGGTG CGGCTACTGG AAGGCATCCG CGAGACCGGC 
CTGAACACGA GATTCTACCA GGCCTCGTCC TCCGAGCTGT ACGGCAAGGT GGTGGAGACG 
CCCCAGAAGG AAACCACCCC CTTCTACCCC CGCTCACCCT ATGCCTGCGC CAAGGCCTAC 
GCCTACTACA TCACCGTCAA CTATCGCGAG AGTTATGGCA TGTATGCCTG TAACGGCATT 
CTGTTCAACC ATGAGTCGCC GCGTCGCGGC GAGACGTTCG TCACCCGGAA GATCACCCGG 
GCTGCCGGCC GGATCAAGAC GGGTCTTCAG GATCGGCTCT ATCTCGGGAA TCTGGATGCC 
AAGCGCGACT GGGGCTTTGC CGGGGACTAC GTGGAAGCCA TGTGGCTCAT GCTCCAGCAG 
CAGGAGGCCG ACGACTTCGT GGTGGCCACG GGCGAGACCT GGTCGGTGCG GGAGTTCGCC 
GAACGGGTCT TCGCGCGGCT CGGCATGCCC CTTGAGTGGC AGGGGAAAGG GGGGCACGAG 
AAGGGGATCG ACACGAACAG CGGGAAGATC GTGATCGAGA TCGACCCCCG CTATTTCCGG 
CCGGCGGAGG TGGACCTGCT GCTGGGCGAT CCTGCCAAGG CCCGGCGCCA GCTCGGCTGG 
CAGCCCCGGG TGGACTTCCA GGGGCTCGTG GATATGATGA CCGATGCGGA CCTGGCATTG 
GCCGAGCGGG AGAAGCGGGC CGATGGATAG 

 

Protein sequence

MKRALITGIS GQDGSYLAEL LLGKGYEVHG VIRRSSSFNT GRIDHLYRDP HEPDVRLFLH 
YGDLNDASSI NRVLREVRPD EIYNLGAQSH VRVSFDVPEY TGEIDALGTV RLLEGIRETG 
LNTRFYQASS SELYGKVVET PQKETTPFYP RSPYACAKAY AYYITVNYRE SYGMYACNGI 
LFNHESPRRG ETFVTRKITR AAGRIKTGLQ DRLYLGNLDA KRDWGFAGDY VEAMWLMLQQ 
QEADDFVVAT GETWSVREFA ERVFARLGMP LEWQGKGGHE KGIDTNSGKI VIEIDPRYFR 
PAEVDLLLGD PAKARRQLGW QPRVDFQGLV DMMTDADLAL AEREKRADG